Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2557 |
Symbol | |
ID | 4174312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3100960 |
End bp | 3102069 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638055574 |
Product | biotin synthase |
Protein accession | YP_662127 |
Protein GI | 109898872 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0502] Biotin synthase and related enzymes |
TIGRFAM ID | [TIGR00433] biotin synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000730416 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGTCA ATGTCGACGC AACTAGCAGC AGTGGCGCCA GTGAAGTACG CCACGATTGG ACGTTAGCAG AAGTGAACGC CTTATTCGCC ATGCCATTTA ACGATTTATT GTTTAAAGCT CAGTGCGTAC ATAGGGCGCA TTTCGACCCG AACTACGTAC AGGTCAGTAC TTTACTGTCG ATCAAAACGG GCGCTTGCCC AGAAGATTGC AAATACTGCC CGCAAAGTGC CCGCTATGAT ACCGGTCTTG AAAAAGAGCG TTTAATGGAA ATTGAAAAAG TCATTCAGCG GGCTCGCGAG GCAAAGGCGG CTGGTTCAAC GCGTTTTTGC ATGGGTGCCG CTTGGCGAAA CCCCAAAGAG CGCGATATGC CTTATGTGAC CGACATGGTA CGTGAAGTCA AAAAGCTTGG CCTGGAAACC TGCATGACCC TTGGCATGTT GACGCGCGAG CAAGCCATTG CATTGCAACA AGCTGGCCTT GATTATTACA ACCATAATCT GGACACATCG CCAGAATTCT ATGGTGATAT CATTACCACA CGTACTTATC AGGACCGTTT AAATACTTTA GATGCGGTGC GTGAAGCAGG CATGAATGTG TGTTCAGGCG GTATCGTTGG TATGGGTGAA ACAGGCTCAG ACCGATCGGG TTTATTGATG CAGCTCGCTA ATTTAGAACA TCAACCTGAA AGTGTGCCTA TTAACATGTT AGTGAAGGTC AAAGGTACCC CAATGGAAAA CGTAGAAGAC TTAGATTATT TTGAGTTTAT TCGTACTATC GCCGTTGCCC GTATCATGAT GCCTAAATCA TTCGTGCGCT TATCTGCTGG GCGTGAAGCC ATGAATGAGC AAATGCAGGC CATGTGCTTT ATGGCTGGTG CTAATTCGAT TTTCTATGGT TGCAAGCTAT TGACTACATC AAACCCTGAG ACGCACGAAG ACGTGATGCT ATTCAAAAAG TTGGGCATCA ATGCCAAGCA AACCCGCGAG TATTCTGATG AAGCTCATCA AGCGGCCTTG CTAGATGAAA TTCAAACCAA TGAAGCACCT CAAGCACCTG AAATGTTCTA TGATGCTACC CAGAAAAAAC CAGAAACAGT AAACATTTAA
|
Protein sequence | MSVNVDATSS SGASEVRHDW TLAEVNALFA MPFNDLLFKA QCVHRAHFDP NYVQVSTLLS IKTGACPEDC KYCPQSARYD TGLEKERLME IEKVIQRARE AKAAGSTRFC MGAAWRNPKE RDMPYVTDMV REVKKLGLET CMTLGMLTRE QAIALQQAGL DYYNHNLDTS PEFYGDIITT RTYQDRLNTL DAVREAGMNV CSGGIVGMGE TGSDRSGLLM QLANLEHQPE SVPINMLVKV KGTPMENVED LDYFEFIRTI AVARIMMPKS FVRLSAGREA MNEQMQAMCF MAGANSIFYG CKLLTTSNPE THEDVMLFKK LGINAKQTRE YSDEAHQAAL LDEIQTNEAP QAPEMFYDAT QKKPETVNI
|
| |