| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2556 |
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| Symbol | |
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| ID | 4174311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3099728 |
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| End bp | 3100960 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638055573 |
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| Product | 8-amino-7-oxononanoate synthase |
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| Protein accession | YP_662126 |
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| Protein GI | 109898871 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
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| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00135119 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTTG ATTTTATTCA AGCCGCGCTC GCCGCGCGGC GCAAAGACAA CTTATTTCGC
CAAGTCACCA CGTTAGATTC CTCTATTGGT GCGCTAATCG AGGTGGGCGG TCAGCACTAT
TTAAACTTCT CCAGCAATGA TTACCTCGGT ATGCGCCAAT CAACTGCTGT GATGCAGGGC
TGGGTAGATG GTATTGGCCA ATTTGGCGGT GGCAGTGGTG CATCGCCTTT GGTCACTGGC
CACACCCGAG CTCATCAAGC GTTGCAAGAC AACTTAGCCC ATAGCCTAAA TCGTGAAGCA
GTCATGTTAT TCAATTCTGG CTTTGGAGCG AATCAGGCTG CATGTCAGGC TCTGTTTCAG
GTCAAAGCCC ATTCTTCTGT TCTTCAAGAT AGCGGGGAGG GCTACATACT GGCAGATAAG
TTAATGCATG CCTCTTTGCT TGATGGAGCT ATGGGCAGCA ATGCTACTTT GCGCCGATTT
GTGCACAATG ATTGCACGCA TCTACAGGCT CAGCTGAGTA AGATACGCGC TAGCGACGCG
CAAAAGTCAG GCAAAGAGCA AGATGTATTG CTGGTAACCG AAGGTGTGTT CAGCATGGAT
GGCGATCAAG CACCGCTTCA AGCGTTGGCG GGTATCAGTG AGCAGCATAA CGCCTGGCTT
ATGGTTGATG ATGCTCACGG TTTCGGCGTG TTAGGTGAAA CCGGCATGGG CTGTGTTGAA
CAAGCGGGTT TGAGCCAACA TCAGGTACCG GTGTTGATGG CTACATTTGG AAAAGCGGTG
GGTACCTCAG GGGCATTTAT CGCCGGTAGC CAAGATTTGA TAGATTATTT AAGTAATTTT
GCTAAGCATT ATATTTACAG TACCGCTATG CCGCCAGCGC AAGCCGTTGC CACCTTGGCG
AGTTTGCAAG CGATTCAACA AAGTGATCAG CGAAGCTTGC TGCAACAAAA TATTGACGAA
TTTCGCAAGC TTGCCACTGC TGCTGGGATC CCATTGACAT CATCCATCAC CGCTATTCAG
CCTATTATTA TTGGTTGCCC GAAACGCACG TTAGTTATCA GTCAACGGCT GCGGGAAATG
GGATTGTGGA TCAGCGCTAT TCGCACGCCG ACTGTTCCAA AAGGAACGGA CCGCTTGCGC
ATTACCTTGA GTGCTTCTCA CCATAAAAGA GACATTCAAG CCTTAGTGGA TGGCTTAGCG
CTTGTGATGG ATGAATTACC TGATGACAAG TAA
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| Protein sequence | MAFDFIQAAL AARRKDNLFR QVTTLDSSIG ALIEVGGQHY LNFSSNDYLG MRQSTAVMQG
WVDGIGQFGG GSGASPLVTG HTRAHQALQD NLAHSLNREA VMLFNSGFGA NQAACQALFQ
VKAHSSVLQD SGEGYILADK LMHASLLDGA MGSNATLRRF VHNDCTHLQA QLSKIRASDA
QKSGKEQDVL LVTEGVFSMD GDQAPLQALA GISEQHNAWL MVDDAHGFGV LGETGMGCVE
QAGLSQHQVP VLMATFGKAV GTSGAFIAGS QDLIDYLSNF AKHYIYSTAM PPAQAVATLA
SLQAIQQSDQ RSLLQQNIDE FRKLATAAGI PLTSSITAIQ PIIIGCPKRT LVISQRLREM
GLWISAIRTP TVPKGTDRLR ITLSASHHKR DIQALVDGLA LVMDELPDDK
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