| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2535 |
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| Symbol | |
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| ID | 4174290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3074687 |
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| End bp | 3075568 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055552 |
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| Product | GumN |
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| Protein accession | YP_662105 |
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| Protein GI | 109898850 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0181444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTAT TTCGCTCGGC TTTTTACTCA GTTTCTGTAC CACTCATTGC GGCCATCTCG
ATGTTCACCA CCACGGTGGA CGCCGCTTCA GTATGGAAGG TCACCTCTGG CGACAACAGC
TTATATATTG GCGGCACTAT TCATATCTTG GCCCCAGAAG ATTACCCCTT ACCCAGTGAA
TATGAAACGG CCTATCAACA CGCTTCCACC CTAGTGTTTG AAACAGATAT GACGGCGGTA
AAAAGCGTTG AGTTTCAGCA AAAAATGTTA GGTATGATGA CTTACACTGA TGGCCGATCA
CTCAAAGACG ACTTATCACA ACAAAGTTAC CAAAAACTCG AAACGCATTT AGCCCAGCGG
GGTATACCGA TTGCGCAAAT GGCGGCAATG AAGCCGAGCC TTATTAGCAT TACCCTGAGT
ATTATCGAAC TGCAAAGCCT AGGCTTTACT AGTGAAGGCG TTGACCAATT TTACTCTGAC
AAAGGCACTC ACGCGGGTAA AACCATTCAA TGGCTTGAAA CCCCAGATGA ACAATTGAGT
TTTCTCGCCA ATTTGGGTGG TGACGATAAC GACGCCCTGA TTGAATACAC CTTGCGAGAC
ATTAAGAAAA TGCCCGTTTT AATAGGCGAC ATGCGCACCA GTTGGCGCGA GGGCGATATG
CAAAAAATGG CGGACATCAG TATCGTGCCT TTTAAACAAG ACTATGCACA AATTTACCAA
GATTTGATTG TCACCAGAAA CGCTAATTGG ATGCCACATA TAGAAGACAT GCTAAAAACA
TCGAACGTAG AATTTATTAT GGTCGGTGCC ATGCACCTTG CGGGCGATGA CAGCGTATTA
AAGCAGTTAA AAGCGCAGGG CTACCGCGTA GAAAAATTAT AG
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| Protein sequence | MSLFRSAFYS VSVPLIAAIS MFTTTVDAAS VWKVTSGDNS LYIGGTIHIL APEDYPLPSE
YETAYQHAST LVFETDMTAV KSVEFQQKML GMMTYTDGRS LKDDLSQQSY QKLETHLAQR
GIPIAQMAAM KPSLISITLS IIELQSLGFT SEGVDQFYSD KGTHAGKTIQ WLETPDEQLS
FLANLGGDDN DALIEYTLRD IKKMPVLIGD MRTSWREGDM QKMADISIVP FKQDYAQIYQ
DLIVTRNANW MPHIEDMLKT SNVEFIMVGA MHLAGDDSVL KQLKAQGYRV EKL
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