| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2533 |
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| Symbol | |
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| ID | 4174288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3071170 |
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| End bp | 3071514 |
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| Gene Length | 345 bp |
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| Protein Length | 114 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055550 |
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| Product | nitrite reductase (NAD(P)H), small subunit |
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| Protein accession | YP_662103 |
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| Protein GI | 109898848 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAG AACAAAATTG GACAGATATT TGTCACCTTA ATGATTTGGT TGATAACTCA
GGCGTGTGTG CGTTAGTGAA AGAGCAACAA GTGGCCATTT TTAAAGTACG AGAGAAAGGC
GAAGTACACT TTTATGCCAT CAGTAACTGG GATCCTATTG GTAAAGCAAA TGTGTTGTAT
CGAGGTTTGA TTGGTTCAGT GGCAGATAAA ACTGTGATTA TTTCGCCTTT GTACAAACAG
CGTTACTGTT TAACAAGCGG TAAATGCCTA GACGATGAAG CGCGTAAAGT CAGTGTCTAT
GACGTGCGTG TTGAGGGCGA CAAGGTGCAG CTAGCGGTGG CGTAA
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| Protein sequence | MSTEQNWTDI CHLNDLVDNS GVCALVKEQQ VAIFKVREKG EVHFYAISNW DPIGKANVLY
RGLIGSVADK TVIISPLYKQ RYCLTSGKCL DDEARKVSVY DVRVEGDKVQ LAVA
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