| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2528 |
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| Symbol | |
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| ID | 4174283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3063765 |
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| End bp | 3064877 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055545 |
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| Product | nitrate transporter, putative |
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| Protein accession | YP_662098 |
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| Protein GI | 109898843 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.341637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAC CAGAACAACC AAATATTACG CTTGGGTTTA TCCCGCTCAC CGATTCCGCG
CCCCTTGTTG TCGCCAAAGA GCTAGGCTTT TTTGAACAAT GGGGCCTTAG CGTAACGTTG
CAAAAACAAA ACTCATGGGC AACTCTCAGG GACAAGCTCC ATGCAGGTGT GTTAGACGCG
GCACAAATGC TGGCGCCTAT GCCAATTGCC AGCGCATTAG GGCTTGGGGC GCCGCCAGCA
AATGTGATCA CACCTTTAGT ACTCAGTTTA AATGGCAATG CCATCACCCT TTCAGAAAGT
TTGTTGCAAG AAATACTCAA AGAAAATGAT CTAACCAATG TCACGCTACC GATGGCAGGC
TACTTATTAC AACACGTGGT CGAGAAACGT AAGCGTCAGG GGTTATCTAA ACTGAAATTC
GCTACGGTTT TTCCATATAG CTGTCATTAC TACCAGCTAA GAGATTGGCT TAAAGCGGCA
AAAGTAAGTT TAGACGACGT TGAAATGTTA GTTGTGCCAC CTGTCAGCAT GGTTGAATGT
TTGAAAAACG GTGATATTGA TGGCTTTTGT GTCGGCGGCC CATGGAACGC CAAAGCGGTT
CGCGCAGGCA TCGGCATGAC GGCGCTAACG TCGTTCGATA TCTGGCAAGA CTCACCTGAG
AAGGTATTGG GCTTGCTAGA TAGTTTCAAC AAAAAACATC CTAATACGGT ATTAGCGTTG
TGTGCAGCCC TTAAGCAAGC CTGTGCTTGG CTCGAATCTG TGCCCAATCG TTTTGAAGCC
GCTAGATTAC TTTGCCGACA AGAATACTTA AATGCTGAAC TTGATGTAAT AGCGCCGTCA
TTGCTCGGTA GTTGTTTAAC GCACAAGTCG CTGCCGCCGC GCAGCATTCC TTCTTATAAT
CAATTTTCTG TGAGCAATAA TGGTTGCATT AACCAGCCTG AGTTGGTGCG CGGAGAGTGG
TTAATAAAGC ATATGGTCAG TGCTGGGCAA ATACCGCCAC ATGTGACAAT ACCGCTTGAC
TTGGTCGCTA AGGTCTTTAG GCCTGATATT TACCAAAAAA TGCGCTTGCT GATTGAAGAT
CAAGGCGTGC AGTTTTATCG CCGCTCAGGT TAG
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| Protein sequence | MIKPEQPNIT LGFIPLTDSA PLVVAKELGF FEQWGLSVTL QKQNSWATLR DKLHAGVLDA
AQMLAPMPIA SALGLGAPPA NVITPLVLSL NGNAITLSES LLQEILKEND LTNVTLPMAG
YLLQHVVEKR KRQGLSKLKF ATVFPYSCHY YQLRDWLKAA KVSLDDVEML VVPPVSMVEC
LKNGDIDGFC VGGPWNAKAV RAGIGMTALT SFDIWQDSPE KVLGLLDSFN KKHPNTVLAL
CAALKQACAW LESVPNRFEA ARLLCRQEYL NAELDVIAPS LLGSCLTHKS LPPRSIPSYN
QFSVSNNGCI NQPELVRGEW LIKHMVSAGQ IPPHVTIPLD LVAKVFRPDI YQKMRLLIED
QGVQFYRRSG
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