Gene Patl_2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2512 
Symbol 
ID4174267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp3048142 
End bp3048807 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content46% 
IMG OID638055529 
Producthypothetical protein 
Protein accessionYP_662082 
Protein GI109898827 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.721906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCTT CCTTAATAAA CGCTTCCTCA ATGAACGAAA CTCATGGTAA AGCGCCTTCA 
ATAGCGGCGC TCATGTTGGC AGCAGGCCAA AGTAAGCGCT TTAATGGCAT CAAGCAATTG 
GCTGATGTGA ATGGCAAGCC CATGTTGCAT CATACCCTTG ATAATCTGAC ATCCAATGGG 
ACTTTGCTTG AAAAGTTGAC TGAATTGAAT GTCGTTTTAG GGGCTAACGC CGCAGATATT 
GTTTCAGTGG TACCTGCTTA TGCAACATCC CATATATTTA ATCATTGGCA AAAAGGAATG 
GGAGCGACAC TGGCGTTTGG CGTGCAAAAA GTAAACCGCG AGTCATCCCA TTTATTGGTG 
ACTTTAGCTG ATCAGGTCGC TTTAACGCGT GAGCATATAG CCACAATGTT GCATCATTGT 
ATTGCTTCGC CCGAAAAGAT CATTGCCGCT AGATACAAGG GTGTACTGGG TGCGCCAGTC 
GTTTTTCCTC GCCGCTACTT CGCGCAACTA ATGGCATTAA ACGCCGACGC TGGGGCACGT 
AAAATACTGC AGCAACACCA ATATGATGTG TTGGCAATAG ACATGGCTGA TGCACAGCAT 
GACATAGATA CACAAATTGA CCTTGCTCGC TGGCAAGAAA CGCTAGCGAA CAACAGCGCT 
CATTAG
 
Protein sequence
MNASLINASS MNETHGKAPS IAALMLAAGQ SKRFNGIKQL ADVNGKPMLH HTLDNLTSNG 
TLLEKLTELN VVLGANAADI VSVVPAYATS HIFNHWQKGM GATLAFGVQK VNRESSHLLV 
TLADQVALTR EHIATMLHHC IASPEKIIAA RYKGVLGAPV VFPRRYFAQL MALNADAGAR 
KILQQHQYDV LAIDMADAQH DIDTQIDLAR WQETLANNSA H