| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2510 |
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| Symbol | |
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| ID | 4174265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3045359 |
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| End bp | 3047614 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055527 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_662080 |
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| Protein GI | 109898825 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.398097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCTC GTAATGACAT AAAATCAGTC AGTCGCCGAG ACTTCTTACG CTATACCAGT
GTTGCTGGCG GTGCTCTGGT TTTGGGCACG CTGCTGCCTA GCATAACGCC CGCTTGGGCT
TCATCAAATG TTGAAAATAC TGCAAATACG TTGAACTTGT TTGTCAGCAT TGATAATGAC
GGCAACGTCA AGATCGTTTG TCATCGTAGC GAAATGGGAC AAGGTGTGCG CACGGGGATT
CCACAGATCG TCGCTGATGA GTTATGCGCT GATTGGTCAA AAGTGAAGGT GGTGCAAGGA
CTCGGTGACG AAGCATACGG CAGCCAAAAC ACCGATGGCT CTCGCTCAAT TCGCCGCTTT
TATACCACGA TGCGCGAAAT GGGCGCGACC GCCAGAACCA TGCTTGAAAA TGCTGCAGCT
CAGACATGGG GCATTCCTGT TAGTGACGTT TTCGCCGAAA ACGGTGCTGT AGTGCATAAA
AGCTCAGGCA AGTCGTTGAG CTTTGGTGAG TTAGCACAGA TGGCAAGCCA GCAAAGCGTT
CCAGAGATAA AAGATTTAAC GTTCAAATCA CCAAAAGACT TTACATTGAT TGGCAAGCCA
GTGACATCAG TTGACTTACC TAAAGTACTG ACCGGAGACA CGGTGTTTGG TCAGGATGTG
CAATTGGACG GCATGCTTTA CGCGAGCATT GAGCGTTGCC CAGTTGTCGG TGGGACGGTA
AAAACATTCG ATAAAGAAGC GTCGCGCGGC GTGGCAAATG TGGTTGACGT GATTGAAATG
CCCGAGCAAA GTTTTCCAGT ATTGTTTAAG AATTTGAATG GCGTTGCGGT ATTGGCTCGT
AATACTTGGT CAGCACTACA AGGTCGCAAG GCGTTGAATG TCACCTGGGA TTTAGGCGAT
AACCAAAGTC ACGATTCAGA TGCTTATTTA GCTGAACTTG AGAAGCGCAT AGTCACCAAG
GGCAAGTCAA TTCGAAGTGT GGGTGATGCG TATCAAGCAT TTGATACGGC AGAAACGAAA
CTTGAAGCAA CTTACACTGT GCCTTATTTG GTGCATGCCC CCATGGAGCC ACCTGCGGCC
ACCGCAGTGT TTAAAGATGG CCACTGTGAA GTGTGGGCAT GTACCCAAAC GCCGCAATCC
ACCCAACAGA ATGTTGCCGG TGCCCTAGGG ATTGATAAGA GTAAGGTGAA AGTGAACGTT
ACTTTGTTGG GCGGAGGCTT TGGACGTAAA TCTAAACCCG ATTTTTCAGT AGAAGCAGCG
GTATTGGCGC AGAAAACCGG TAAGCCAGTA AAAGTGGTGT GGAGCCGTGA AGATGATATT
CGCCATGGCT ATTATCATGC GATCAGTGCC CAACATTTCC AAGCTGGGCT AGATGAGGCC
GGTAAAGTCA CAAGTTGGGT TCAACGTACT GCGTTTCCCA GTATTAGTTG GACATTCACC
GGCACCACTG ACGAGCCACA AACGGGGGAA TTATCCCTTG GTTTTGGTGA TCTTCCTTTT
GCTATCGAAA ACTTGTCTTG TGAAACTCAT AAAGCGCCGG CCCATGTGCG TATTGGTTGG
ATACGTTCAG TGAGTAATAT TCAACACGGC TTTGCGATTG GCTCGTTTGT GGATGAACTA
GCGGCAAAAT CTTCGATTAG CCCGCATCAG ATGTGGCTAA ACCTCATCGG GGATGATCGA
ATAGTTGATC CGAAAACCCA AGGGTTTAAA TATGAAAATT ATGGTGAGTC TTACGATAAT
TTTCCTATCG AAACGAAGCG CTTGAAGAAT GTGTTAAACG AACTGATGGC GAAGTCGGGG
GCGAATAACC CTACAGCCGC CAATGAAGGC TGGGGGATAA GTGTTCATCG TAGCTTTGTA
TCTTATGTGG CGGTGGCCAC TAAAGTGAAA GTAGCAAACG ACAAAGTCTC CGTGCTTGAA
ATGCATTCTG TGATTGATGC GGGGAGGGTG ATTAACCCTG ACCGAGTAAA ATCACAGCAA
GAAGGGGCAA TGATATTTGG TTTATCAATT GCCTTAATGG GGGAAGTTAC GATAAAAGAA
GGCGCAATTG AGCAGTCTAA TTACCATGAT TATACTGTAC TTCGTATGCA CCAGAGTCCA
AAAATTGTGA CCCACATTAT TCAGTCAGAC GCAGCGCCAG GTGGCGTGGG TGAGCCTGGC
GTGCCACCTG TGGCCGCTTC GGTAACCAAT GCGATTTATC AGGCTTCTGG TAAGCGCATT
CGCGCTTTAC CCGTAAGTAA AGTGTACTCG GTTTAA
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| Protein sequence | MSARNDIKSV SRRDFLRYTS VAGGALVLGT LLPSITPAWA SSNVENTANT LNLFVSIDND
GNVKIVCHRS EMGQGVRTGI PQIVADELCA DWSKVKVVQG LGDEAYGSQN TDGSRSIRRF
YTTMREMGAT ARTMLENAAA QTWGIPVSDV FAENGAVVHK SSGKSLSFGE LAQMASQQSV
PEIKDLTFKS PKDFTLIGKP VTSVDLPKVL TGDTVFGQDV QLDGMLYASI ERCPVVGGTV
KTFDKEASRG VANVVDVIEM PEQSFPVLFK NLNGVAVLAR NTWSALQGRK ALNVTWDLGD
NQSHDSDAYL AELEKRIVTK GKSIRSVGDA YQAFDTAETK LEATYTVPYL VHAPMEPPAA
TAVFKDGHCE VWACTQTPQS TQQNVAGALG IDKSKVKVNV TLLGGGFGRK SKPDFSVEAA
VLAQKTGKPV KVVWSREDDI RHGYYHAISA QHFQAGLDEA GKVTSWVQRT AFPSISWTFT
GTTDEPQTGE LSLGFGDLPF AIENLSCETH KAPAHVRIGW IRSVSNIQHG FAIGSFVDEL
AAKSSISPHQ MWLNLIGDDR IVDPKTQGFK YENYGESYDN FPIETKRLKN VLNELMAKSG
ANNPTAANEG WGISVHRSFV SYVAVATKVK VANDKVSVLE MHSVIDAGRV INPDRVKSQQ
EGAMIFGLSI ALMGEVTIKE GAIEQSNYHD YTVLRMHQSP KIVTHIIQSD AAPGGVGEPG
VPPVAASVTN AIYQASGKRI RALPVSKVYS V
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