| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2499 |
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| Symbol | |
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| ID | 4174253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3031009 |
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| End bp | 3032925 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055515 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_662069 |
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| Protein GI | 109898814 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0219257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATAA TTACACTTCC CGACGGCAGT CAACGCCAAT TCGATAACGC AGTTTCAGTA
CTAGACGTGG CAAATGATAT TGGCCCTGGT TTAGCCAAAG CCACCATAGC TGGAAAAGTA
GACGGCGTTC GTGTTGATGC GTGTGACCTG ATAGAGCAAG ACGCACAGTT GCAAATTATT
ACTGCAAAAG ACGACGATGG CTTAGAAATT ATTCGTCACT CATGCGCGCA TTTAATCGGT
CATGCAATCA AGCAATTATG GCCTGACGTC AAAATGGCGA TTGGTCCTAC GATTGACAAT
GGCTTTTATT ATGACATTGA TATGGAGCAT TCTCTTAACG ACGAAGATCT CGTCAAGCTC
GAAAAGCGCA TGCTTGAATT GGCGAAAACC AATTACGATG TGGTTAAGAA AGTCGTTAGC
TGGCAAGAAG CCAGAGACAC ATTTGAAGCA CGCGGTGAAG AGTATAAACT GCAGATCCTA
GACGAGAACA TTCCAAAAGA TGCTACGCCT GGTTTGTATC ATCATGAAGA GTACGTGGAC
ATGTGCCGCG GGCCACACGT ACCTAACATG CGTTTTTGCC AGCACTTTAA ACTAATGAAA
GTGGCTGGTG CCTATTGGCG TGGCGATAGC GACAATAAAA TGTTGCAACG AATTTACGGC
ACCGCTTGGG CTGATAAAAA ACAACTTAAA GCTTACTTGA ATCGTTTAGA AGAAGCTGAA
AAGCGCGATC ACCGCAAAAT TGGTAAAGCG CTGGATTTAT TCCATTGGCA AGAAGAAGCG
CCTGGCATGG TGTTTTGGCA CAACGATGGT TGGAGCATAT ACACAGAGCT TGAGAAATTC
GTGCGCAGCA AATTACGTGA ATACGAATAC GATGAAGTCA AAGCCCCTTT GATGATGGAC
CGCTCTTTAT GGGAGAAATC AGGTCACTGG GATAAGTACG CTGAAAACAT GTTCACTACC
ACATCAGAAA AGCGTGAATA TGCGGTTAAG CCGATGAACT GCCCAGGCCA CGTACAAATC
TTTAATCAAG GTCTTAAATC ATATCGTGAT TTGCCGTTGC GCATGGCCGA GTTTGGCTGT
TGTCACCGTA ACGAGCCATC TGGTGCGTTA CATGGCTTGA TGCGTGTGCG TGGTTTTACC
CAAGATGATG CACATATATT CTGTACCGAT GACCAAATAT TGGCAGAAGT AGGTGGATGT
ATTGATTCAG TTTATGAAAT CTACAAAATA TTCGGTTTCG AGAACATCTC TGTAAAACTC
TCTACTCGTC CTGAAAAACG AGTGGGCAGT GATGAAGTAT GGGACAAAGC AGAAAAAGAA
CTGGCAGAAG CACTCACGTC AAAGGGGATT GATTTTCAAT ATTTGCCGGG CGAGGGTGCA
TTCTATGGTC CCAAGATAGA ATTCACATTG CACGATTGCC TCGATAGAGC GTGGCAGTGT
GGCACAGTCC AGTTGGACTT CTCAATGCCT GGTCGTTTAG GTTCAACCTA TGTCGCTGAA
GATGGTGAAC GTAAAGTGCC GGTTATGATC CACCGTGCAA TTTTAGGTTC ACTTGAGCGT
TTTATTGGAA TTTTGATTGA AGAGTATTCA GGCTTCTTCC CACTTTGGTT AGCCCCTACT
CAAGCAGTTG TGATGAATAT TACTGATAAT CAGAGCGAAT ATGCGCAAAA AGTAGTGAAA
AAACTAAAAG AAATTGGAAT TAGAGCCAAG TCAGACTTGA GAAATGAGAA GATAGGCTTT
AAAATCCGCG AGCACACGCT TAGGCGTGTC CCGTATTTGC TTGTCGTTGG TGATAAAGAA
ATTGAAGCTG GCGAAATAGC AGTACGTTCA CGCAAAGGCG ATGATCTTGG TAAGATGTCG
GTCGATGCTT TCATTGAATT GGCTTGTGAA CAGATCAAAA GCAAACAAAT TCAGTAA
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| Protein sequence | MPIITLPDGS QRQFDNAVSV LDVANDIGPG LAKATIAGKV DGVRVDACDL IEQDAQLQII
TAKDDDGLEI IRHSCAHLIG HAIKQLWPDV KMAIGPTIDN GFYYDIDMEH SLNDEDLVKL
EKRMLELAKT NYDVVKKVVS WQEARDTFEA RGEEYKLQIL DENIPKDATP GLYHHEEYVD
MCRGPHVPNM RFCQHFKLMK VAGAYWRGDS DNKMLQRIYG TAWADKKQLK AYLNRLEEAE
KRDHRKIGKA LDLFHWQEEA PGMVFWHNDG WSIYTELEKF VRSKLREYEY DEVKAPLMMD
RSLWEKSGHW DKYAENMFTT TSEKREYAVK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGC
CHRNEPSGAL HGLMRVRGFT QDDAHIFCTD DQILAEVGGC IDSVYEIYKI FGFENISVKL
STRPEKRVGS DEVWDKAEKE LAEALTSKGI DFQYLPGEGA FYGPKIEFTL HDCLDRAWQC
GTVQLDFSMP GRLGSTYVAE DGERKVPVMI HRAILGSLER FIGILIEEYS GFFPLWLAPT
QAVVMNITDN QSEYAQKVVK KLKEIGIRAK SDLRNEKIGF KIREHTLRRV PYLLVVGDKE
IEAGEIAVRS RKGDDLGKMS VDAFIELACE QIKSKQIQ
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