Gene Patl_2498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2498 
Symbol 
ID4174252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3030446 
End bp3030910 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content44% 
IMG OID638055514 
Producttranslation initiation factor IF-3 
Protein accessionYP_662068 
Protein GI109898813 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00683377 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTGGAA AGGATGGGGA GCAGATTGGC GTTGTATCAA TCACTGAAGC TCTCGAGACG 
GCTGAGCAAT CTAATTTAGA TTTGGTTGAA ATTAGCCCTA ATGCAGAACC GCCTGTATGT
AAGGTAATGG ATTACGGAAA ATTCATCTTC GAAAAGAGTA AAGCTCAGAA AGAGCAAAAG
AAGAAACAAA AGCAAATTCA GGTCAAGGAG ATTAAATTTC GCCCTGGCAC TGATGAAGGC
GATTACCAGG TAAAACTGCG CAACCTGCGT CGCTTTCTAG AAGGTGGTGA TAAGGCTAAA
GTAACGATCC GCTTCCGCGG CCGTGAAATG GCTCATCAAG ATATCGGTAT TGATCTACTT
AATCGCGTTA AAGTTGATTT AGAAGACATT GCCAACTGCG AATCCTTCCC TAACCGGGTT
GAAGGTCGTC AGATGATCAT GGTGCTCGCC CCAATTAAGA AGTAA
 
Protein sequence
MVGKDGEQIG VVSITEALET AEQSNLDLVE ISPNAEPPVC KVMDYGKFIF EKSKAQKEQK 
KKQKQIQVKE IKFRPGTDEG DYQVKLRNLR RFLEGGDKAK VTIRFRGREM AHQDIGIDLL
NRVKVDLEDI ANCESFPNRV EGRQMIMVLA PIKK