Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2498 |
Symbol | |
ID | 4174252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3030446 |
End bp | 3030910 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055514 |
Product | translation initiation factor IF-3 |
Protein accession | YP_662068 |
Protein GI | 109898813 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00683377 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTTGGAA AGGATGGGGA GCAGATTGGC GTTGTATCAA TCACTGAAGC TCTCGAGACG GCTGAGCAAT CTAATTTAGA TTTGGTTGAA ATTAGCCCTA ATGCAGAACC GCCTGTATGT AAGGTAATGG ATTACGGAAA ATTCATCTTC GAAAAGAGTA AAGCTCAGAA AGAGCAAAAG AAGAAACAAA AGCAAATTCA GGTCAAGGAG ATTAAATTTC GCCCTGGCAC TGATGAAGGC GATTACCAGG TAAAACTGCG CAACCTGCGT CGCTTTCTAG AAGGTGGTGA TAAGGCTAAA GTAACGATCC GCTTCCGCGG CCGTGAAATG GCTCATCAAG ATATCGGTAT TGATCTACTT AATCGCGTTA AAGTTGATTT AGAAGACATT GCCAACTGCG AATCCTTCCC TAACCGGGTT GAAGGTCGTC AGATGATCAT GGTGCTCGCC CCAATTAAGA AGTAA
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Protein sequence | MVGKDGEQIG VVSITEALET AEQSNLDLVE ISPNAEPPVC KVMDYGKFIF EKSKAQKEQK KKQKQIQVKE IKFRPGTDEG DYQVKLRNLR RFLEGGDKAK VTIRFRGREM AHQDIGIDLL NRVKVDLEDI ANCESFPNRV EGRQMIMVLA PIKK
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