| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2488 |
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| Symbol | |
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| ID | 4174242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3019230 |
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| End bp | 3020342 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055504 |
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| Product | hypothetical protein |
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| Protein accession | YP_662058 |
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| Protein GI | 109898803 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3249] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAAG GCGTCGCTAT TGTAGCTCGA TTGCACCTTA TTTTTTGTCT GACATTATGT
TTTTTAGCGA GTGCTAATGC GGGTGTCATT GAAGGATTAT ACAATGCGCA AGTTGAGGTT
GCAGACCAAT CAACGGCCAC GCAGAATGCG GCCATACGCG ATGGTCTACA AGATGTATTT
GTGAAGGTCA GTGGTAATTC GACTTTGTTG AATGACCCTC AAATCAAGCA ACAGCTTAAG
CAAGCGAAAC GTTACTTACG CACTTATCGG TTTGAGCAAA CTCCTGAGCA TTTGTATCTT
GCGGTAAACT TTGATCAGGA AAAAGTAGAT AAGCAATTAC GTGATTCAGG TTATCGAATT
TGGGATAAGC TCCGCCCAGA AACCATATTA TGGTTGGCGA TTAAGGAGCC TAACGGTCGT
CGTGAGTTGG TCTCTGAAGG CGGTCATCAA GAATTGTTTG TTGCTGCGCA AAAGGTGGCA
AAACGCAGAG GGGTCGAGAT TGTTCAACCA TTATTAGATT TAGATGATAT GCAAAATATC
AGTATCTATG ATGTATGGGG CGGCTTTGTG CATCAACTCG CTCAGGCAAG CAAGCGTTAC
GGCGTGGAAA ATGTCCTTTC AGCCAGGATC TACCAATTAG AAAACAACGA TGCTGAAGAA
AATGATGAGC AAGGCAGTGC TCAAGGTGTT GATGTTGCTT GGCGAGCCGA TTGGACGTTA
CTGGAAGCGG GAAGCACAAG CGTTGGAACT GTTTCAGGAG CAGATCAAGA GCAAGTGGTC
AGTGCGGTTA TCGAAGGTAT GGCTGACAAC CTAGCGAACA AATACGCAAT TGATTTTAGC
CGTTTCGATC CAGCTGCTAT GCGGACCATA GTCACCATAA ATAACTTAAG TAGCCTTAGA
CAATACGGAG AAATATTAAC GTTTTTTAAT AGTCTAAGTG TCGTAAGTTC AGCCAGTTTA
GTGAGTCAAA ACGGCCAAGT GGCGAAGTTC GAACTAAGCT TGTTAGGCGA GGTAGACAAC
CTCATAGATG CAATGAGCTT AGATAACCGA ATTTCTCCTG TGAATCGCTT CGAGCTGGAT
AAGCAAAAGT TGGAGTATTT CTGGAAACTA TAA
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| Protein sequence | MFKGVAIVAR LHLIFCLTLC FLASANAGVI EGLYNAQVEV ADQSTATQNA AIRDGLQDVF
VKVSGNSTLL NDPQIKQQLK QAKRYLRTYR FEQTPEHLYL AVNFDQEKVD KQLRDSGYRI
WDKLRPETIL WLAIKEPNGR RELVSEGGHQ ELFVAAQKVA KRRGVEIVQP LLDLDDMQNI
SIYDVWGGFV HQLAQASKRY GVENVLSARI YQLENNDAEE NDEQGSAQGV DVAWRADWTL
LEAGSTSVGT VSGADQEQVV SAVIEGMADN LANKYAIDFS RFDPAAMRTI VTINNLSSLR
QYGEILTFFN SLSVVSSASL VSQNGQVAKF ELSLLGEVDN LIDAMSLDNR ISPVNRFELD
KQKLEYFWKL
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