Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2481 |
Symbol | |
ID | 4174235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3013697 |
End bp | 3014767 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055497 |
Product | hypothetical protein |
Protein accession | YP_662051 |
Protein GI | 109898796 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.691389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGTG TGTTCGAAAG ATGGTATAAG CGCAAATTCT CTGATCCTGA TTCCGTTATG TTGCTGATAA TGCTAATTGC TGTGTCTGTG CTGTTGGCAT TGTTAGGCAC CATTTTAATG CCAGTATTAG TAGCCGCTGT CATTGCCTAT TTATTGGATT GGCCTGTAAG TCAGTTGTCG CGCTCAGGTA TGCGTAGAGG CTTTGCTTGT AGTGTGGTTA TCTTTGGCTT TTTGACATTA TGTATTTTGA CCTTTATCGG CATTGTGCCT GTGGTATCAC AGCAAAGCAT TAATCTCATT CGCGAAATGC CGCAAATCTG GGGGCACGCA CAAGTATGGT TATTGCAGTT ACCTGAGCAG TACCCCGATT TTGTGCATTT GGGGGATGTG CAAGACATGC TTGATGGCGT GAATGAACGT ATTGTTAGTT TGGGGGAACA ACTTCTTTCA GCTTCTGTTA GTTCCCTTGG GAGTTTAGCG TCTTTGTTAA TTTACCTTGT GTTGGTGCCA TTAATGGTGT TTTTCATGCT CAAGGACAAA GATCAGCTGC TAGACAATTT GTCGCCGCTT TTACCGTCTC AGCGCCGTCT TATAAAGCAA GTAGGTAGCG AGATGAATAC CCAAATTGCC AACTACATTC GTGGTAAAGT CATCGAAATT ATTATAGTGG GCACGATATC AGCCGTAACC TTCGCCTTGA TGGATTTACG CTATGCCTTG CTGCTTGGCG TGTTGGTGGG CTTTTCAGTA TTGATACCTT ATATCGGTGC TGCCGTGGTG ACAATTCCTG TGGCGGTAGT GGCCTTATTT CAGTGGGGAA TAACACCGGA TTTTTGGTGG TTAATGATTG CTTATGGGGT GATTCAGGCA CTCGATGGAA ACGTGCTTGT GCCGGTGCTA TTTTCTGAAG CGGTAAGCTT ACATCCGGTG TACATCATTA TCGCAGTGTT ATTTTTTGGC GGTTTATGGG GCTTCTGGGG CGTGTTTTTT GCCATCCCAC TGGCGACGCT GGTAAAAGCG GTGATTAATG CTTGGAAAGG GCCTTTGCAG GAGCTTCCTC CCGCTATTTA A
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Protein sequence | MISVFERWYK RKFSDPDSVM LLIMLIAVSV LLALLGTILM PVLVAAVIAY LLDWPVSQLS RSGMRRGFAC SVVIFGFLTL CILTFIGIVP VVSQQSINLI REMPQIWGHA QVWLLQLPEQ YPDFVHLGDV QDMLDGVNER IVSLGEQLLS ASVSSLGSLA SLLIYLVLVP LMVFFMLKDK DQLLDNLSPL LPSQRRLIKQ VGSEMNTQIA NYIRGKVIEI IIVGTISAVT FALMDLRYAL LLGVLVGFSV LIPYIGAAVV TIPVAVVALF QWGITPDFWW LMIAYGVIQA LDGNVLVPVL FSEAVSLHPV YIIIAVLFFG GLWGFWGVFF AIPLATLVKA VINAWKGPLQ ELPPAI
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