Gene Patl_2481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2481 
Symbol 
ID4174235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3013697 
End bp3014767 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content45% 
IMG OID638055497 
Producthypothetical protein 
Protein accessionYP_662051 
Protein GI109898796 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.691389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGTG TGTTCGAAAG ATGGTATAAG CGCAAATTCT CTGATCCTGA TTCCGTTATG 
TTGCTGATAA TGCTAATTGC TGTGTCTGTG CTGTTGGCAT TGTTAGGCAC CATTTTAATG
CCAGTATTAG TAGCCGCTGT CATTGCCTAT TTATTGGATT GGCCTGTAAG TCAGTTGTCG
CGCTCAGGTA TGCGTAGAGG CTTTGCTTGT AGTGTGGTTA TCTTTGGCTT TTTGACATTA
TGTATTTTGA CCTTTATCGG CATTGTGCCT GTGGTATCAC AGCAAAGCAT TAATCTCATT
CGCGAAATGC CGCAAATCTG GGGGCACGCA CAAGTATGGT TATTGCAGTT ACCTGAGCAG
TACCCCGATT TTGTGCATTT GGGGGATGTG CAAGACATGC TTGATGGCGT GAATGAACGT
ATTGTTAGTT TGGGGGAACA ACTTCTTTCA GCTTCTGTTA GTTCCCTTGG GAGTTTAGCG
TCTTTGTTAA TTTACCTTGT GTTGGTGCCA TTAATGGTGT TTTTCATGCT CAAGGACAAA
GATCAGCTGC TAGACAATTT GTCGCCGCTT TTACCGTCTC AGCGCCGTCT TATAAAGCAA
GTAGGTAGCG AGATGAATAC CCAAATTGCC AACTACATTC GTGGTAAAGT CATCGAAATT
ATTATAGTGG GCACGATATC AGCCGTAACC TTCGCCTTGA TGGATTTACG CTATGCCTTG
CTGCTTGGCG TGTTGGTGGG CTTTTCAGTA TTGATACCTT ATATCGGTGC TGCCGTGGTG
ACAATTCCTG TGGCGGTAGT GGCCTTATTT CAGTGGGGAA TAACACCGGA TTTTTGGTGG
TTAATGATTG CTTATGGGGT GATTCAGGCA CTCGATGGAA ACGTGCTTGT GCCGGTGCTA
TTTTCTGAAG CGGTAAGCTT ACATCCGGTG TACATCATTA TCGCAGTGTT ATTTTTTGGC
GGTTTATGGG GCTTCTGGGG CGTGTTTTTT GCCATCCCAC TGGCGACGCT GGTAAAAGCG
GTGATTAATG CTTGGAAAGG GCCTTTGCAG GAGCTTCCTC CCGCTATTTA A
 
Protein sequence
MISVFERWYK RKFSDPDSVM LLIMLIAVSV LLALLGTILM PVLVAAVIAY LLDWPVSQLS 
RSGMRRGFAC SVVIFGFLTL CILTFIGIVP VVSQQSINLI REMPQIWGHA QVWLLQLPEQ
YPDFVHLGDV QDMLDGVNER IVSLGEQLLS ASVSSLGSLA SLLIYLVLVP LMVFFMLKDK
DQLLDNLSPL LPSQRRLIKQ VGSEMNTQIA NYIRGKVIEI IIVGTISAVT FALMDLRYAL
LLGVLVGFSV LIPYIGAAVV TIPVAVVALF QWGITPDFWW LMIAYGVIQA LDGNVLVPVL
FSEAVSLHPV YIIIAVLFFG GLWGFWGVFF AIPLATLVKA VINAWKGPLQ ELPPAI