| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2478 |
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| Symbol | |
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| ID | 4174232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3011540 |
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| End bp | 3012421 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055494 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_662048 |
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| Protein GI | 109898793 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.376432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACTG GTAGTTACGT TGCATTAATC ACCCCCATGT ACCAATCAGG CGAGATAGAT
TATCCGTCGT TAAAGAAGTT GGTTGATTTT CATATTGCTA ATGGCAGTCA TGGCTTAATT
GCTGTAGGCA CCACGGGCGA GTCTGCCACG TTACCCTTTG ATGAGCACAT TGAAGTGGTC
AAGCGCATGG TCGAGTTCGC TGATAAGAAG ATACCGGTAA TCGCTGGAAG TGGAGCCAAC
TCTACCGCTG AAGCGATATT TTTAAGCGAG CAAATGGCTG GTACTGGGAT TGATGGTTTC
CTTAGTGTTG TGCCTTATTA CAACAAGCCG CAACAAAAAG GCATGGTGGC GCACTTCAAC
GCGGTTGCAG ATGCGACTGA TTTGCCGGTT CTGTTGTACA ACGTACCTGG GCGTACGGTT
GCAGATATGC TGCCTGACAC AGTGGCGGAA CTCGCAACAC ACCCTAAAAT TGTTGGCCTT
AAAGATGCCA CCGGTGATAT TGCCCGTTTA AAACAAATGC AACCTTTAGT AGATAAAGAC
TTTGTATTCT TAAGTGGCGA CGATGCTACA GGATGTGAGT TTTTAACGGC AGGGGGGCAC
GGCGTTATTT CAGTGACGGC GAATGTTGTA CCTAAGCAAA TGTCTCAGAT GTGTGAAGCG
GCGCTTGCCG GTAATTACTC CAAAGCCAAA GAAATCGATC AGCAAATAGC CGAGCTTCAC
AGCGCTCTAT TTATTGAACC AAATCCAGTA TTGCCTAAGT GGGCTTTATA CAAAATGGGG
CTCATTCAAT CTGCATTTTT GCGTTTACCG TTAATTGAAT CGGAACTTGA TAGCCAAAAT
CATATCGAAC AAGTCATGCG CAATTCGGGC GTATTATCTT AA
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| Protein sequence | MFTGSYVALI TPMYQSGEID YPSLKKLVDF HIANGSHGLI AVGTTGESAT LPFDEHIEVV
KRMVEFADKK IPVIAGSGAN STAEAIFLSE QMAGTGIDGF LSVVPYYNKP QQKGMVAHFN
AVADATDLPV LLYNVPGRTV ADMLPDTVAE LATHPKIVGL KDATGDIARL KQMQPLVDKD
FVFLSGDDAT GCEFLTAGGH GVISVTANVV PKQMSQMCEA ALAGNYSKAK EIDQQIAELH
SALFIEPNPV LPKWALYKMG LIQSAFLRLP LIESELDSQN HIEQVMRNSG VLS
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