| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2464 |
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| Symbol | |
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| ID | 4174218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2993515 |
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| End bp | 2994684 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055480 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_662034 |
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| Protein GI | 109898779 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000301038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAAC TGCTTTTTCT GCTATTACCT GTAGCCGCCG GATATGGCTG GGTGATGGGG
CGCAATAGTG TACGTCAAGC ACAGCGTAAG CAATCTAGTA TTTTATCTAA GCATTACTAT
AAAGGCTTAA ATTTCCTCTT ATCTGATGAG CCTGATAAGG CCGTCGATAC TCTCATAAAA
ATGATCAACC TCGACAGTGA TACGGTTGAA ACCCATATTG CCATGGGCAA ATTTTTCAGA
CACCGAGGCG AGTTAGACAG AGCAATACGC GTTCATCAAA ATCTTGTCAG TAAAGAACAA
ATTTCTCCAG CACAGCGCGA ATCTGCCCTC AAAGAATTAG GCAAGGACTA TGTGCTTGCA
GGCTTTTTGG AGCGTGCTGA GAACGCTTTT CTGCAGCTAT TAAATTCAGA CAAACATTTT
CTAGATGCAC AACAGCAGCT TTTCGATATC TATCAAGCCA CCAAAGAATG GGGCAGAGGG
ATTGAGCTGG CTGAGAATAT GATGGAAAAT CATGGCGATA GTGACGAGCT ATGCATTCGC
ATCTCGCATT TTTATTGCGA GCAAGCGGCT ATTTATGTAC GTAAAAATGA ACTTAATCTA
GCCGAGAAAA CCTTGCAAAA AGCCATTATG GCTGACCAAA ATACCGTTCG CCCATGGCTA
ATGCTAGGGC AAATAGCGAT TAGCCAAGAG CAATATCAGA CCGCCATCGA GTACTTACAA
CAGGTGCCTT TGCGTGATGT ATCTTGGTTG AGTGAAGCGG TGCCGTTGAT AGAACAAAGC
GCTGAAGCAC TGGGCGATCT TGAGCAGCTA GAAAAGATCC TTAACGAATA TTGGCAGCAA
TGTGCCACCT CCTATCTAGC CAAAGTGAAA TTAATGGCAC GGCAGGGTTT AACAAAAGAA
GCGGCTGATG TTTTGCTTGA TCAACTGCGT AAACATCCCA CCATGAAAGG CTTTAAAACG
CTTATGGGGT TGTATATTGA ACAACAAGCC CCTGATGAGT CCATGAATAG CCTTGTGCTA
TTAAAAGAGC TTGTTGAAGA GCAGATTAAG CAGCGACCTA AATATCGCTG TCATAGCTGT
GGCTTTTCGG GCGGGCAAAT ACATTGGTTG TGCCCATCCT GTAAAAAATG GGGCCAGGTT
AAACCGATTA AAGGCTTAGA CGGAGAATAA
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| Protein sequence | MLELLFLLLP VAAGYGWVMG RNSVRQAQRK QSSILSKHYY KGLNFLLSDE PDKAVDTLIK
MINLDSDTVE THIAMGKFFR HRGELDRAIR VHQNLVSKEQ ISPAQRESAL KELGKDYVLA
GFLERAENAF LQLLNSDKHF LDAQQQLFDI YQATKEWGRG IELAENMMEN HGDSDELCIR
ISHFYCEQAA IYVRKNELNL AEKTLQKAIM ADQNTVRPWL MLGQIAISQE QYQTAIEYLQ
QVPLRDVSWL SEAVPLIEQS AEALGDLEQL EKILNEYWQQ CATSYLAKVK LMARQGLTKE
AADVLLDQLR KHPTMKGFKT LMGLYIEQQA PDESMNSLVL LKELVEEQIK QRPKYRCHSC
GFSGGQIHWL CPSCKKWGQV KPIKGLDGE
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