| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2463 |
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| Symbol | |
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| ID | 4174217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2992813 |
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| End bp | 2993508 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055479 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_662033 |
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| Protein GI | 109898778 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000296014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGATC CAAAAGTGGT TATCGCACTT GATTTTGATG TAAAGAAAGA CGCACTTGAT
TTTGTAGATA GGATTGACCC ATCTCAGTGC CGTCTAAAAG TCGGTAAAGA AATGTTCACG
TATTTCGGTC CTGAGTTTGT TCGCACTTTG GTGGCGAAGG AGTTCGATGT ATTCCTCGAT
CTCAAATTCC ACGATATTCC AAATACCGTT GCCAAAGCGT GCATAGCCGC CGCAGATTTA
GGCGTATGGA TGGTGAACGT ACATGCTTCT GGTGGCGAAG ATATGATGAT ACGTGCTCGT
GAAGGCTTAG CTCAGTTCGG TCAAGACAAG CCTCATCTTA TCGCAGTAAC AGTGCTTACC
AGCATGGATA AGCGTCAGCT GTCACAAATT GGTATTCAAT CATCGCCCAT GGAGCACGTG
TTAACGCTTG CATCCCTAAC CAAACAAGCA GGACTTGACG GAGTGGTATG CTCGGCACAA
GAAGCTGCAA TGTTAAAAGA GACTTTGGGT AAGGAATTTA TGTTGGTGAC TCCCGGTATT
CGCCCCCAGG GAAGTGACGT TGGTGATCAG AAACGTATTA TGACACCTCA AGAGGCTATG
CAAGTTGGGG TGGATTACAT GGTTATTGGC CGGCCTATTA CGCAAGCGAA GGATCCAGTC
GCTGCGCTTG ACGCTATTAA TGTATCTATT GCTTGA
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| Protein sequence | MQDPKVVIAL DFDVKKDALD FVDRIDPSQC RLKVGKEMFT YFGPEFVRTL VAKEFDVFLD
LKFHDIPNTV AKACIAAADL GVWMVNVHAS GGEDMMIRAR EGLAQFGQDK PHLIAVTVLT
SMDKRQLSQI GIQSSPMEHV LTLASLTKQA GLDGVVCSAQ EAAMLKETLG KEFMLVTPGI
RPQGSDVGDQ KRIMTPQEAM QVGVDYMVIG RPITQAKDPV AALDAINVSI A
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