| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2459 |
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| Symbol | |
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| ID | 4174213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2987635 |
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| End bp | 2988276 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055475 |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_662029 |
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| Protein GI | 109898774 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00395649 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAGTG TTAAATATAT CGGTTACGTG GCGAAGTTAT CAGGGACTTT ATTGCTAATG
TTAGGGGCTA TTTTTAGCGT AAATGCCCAG CAAACCGATG AAGATAAACT GAAAGCGCGA
TTGCAAACCC TACATAACTT TAGCGCCTCG TTTACCCAAA AAGTGACTGA CGCGAATCAC
GAAGTACTGC AAGAAGCAAC TGGGGTGATA AAGCTAAAAC AACCCAACAA ACTATATTGG
GAGCTCAACC CGCCCAATGA AAATATTCTC ATTGCCGATG GCAGTACTCT ATGGAATGTG
GACCCTTTTG TGGAGCAAGT TACTGCCATC AGTCAAGACC AAGCAGTGGC CAATAATCCC
CTTATTTTGC TCACTCAGCC GAACAGTGAC GCTTGGGAGA ATTTCAGTGT TTCTCATACC
AATGATACTT TTCGTATTGA TGCGAAAAAA CCTGATTCTG CAGTACACTC ACTCGTGTTG
GTGTTTGATG GGGCACAGTT AACGTCGATG AGCATGCAAG ACAGCCAGCA GCAAATTAGC
GACTTGTATT TCAATGATAT TCAGCAAAAT AAAACGGTCA GTGATGAGGT CTTTACCTTT
AGTCTGCCTG AAGGCTACGA CTTGGACGAC CAACGTAACT GA
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| Protein sequence | MNSVKYIGYV AKLSGTLLLM LGAIFSVNAQ QTDEDKLKAR LQTLHNFSAS FTQKVTDANH
EVLQEATGVI KLKQPNKLYW ELNPPNENIL IADGSTLWNV DPFVEQVTAI SQDQAVANNP
LILLTQPNSD AWENFSVSHT NDTFRIDAKK PDSAVHSLVL VFDGAQLTSM SMQDSQQQIS
DLYFNDIQQN KTVSDEVFTF SLPEGYDLDD QRN
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