Gene Patl_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2446 
Symbol 
ID4174195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2974682 
End bp2975146 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content39% 
IMG OID638055457 
Producthypothetical protein 
Protein accessionYP_662016 
Protein GI109898761 
COG category[S] Function unknown 
COG ID[COG4337] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.02931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACTA AAGAAATGGT ACATACAGCG CTACAAACGT GGTGCGACAA CGTAGTAAAA 
GTTGGCAAAG TTCATTCTGA AGGAGGCGAC GTTCAAGCGT TTTCTCTGCA GGTACTATCT
GAAAGTTACG ATTACGATAA TGGCCATGTG TTGTTTAAAC CAACACTTAC GTTTGGTCAA
CAGACATTTC GTCCCACGAA AGAAGGTGCA CTTTCTTATT TTGTAGGCGG AAATAGTGAG
TTCCCCGATG ATAAAGGATT CAAGCTTAAG CCATGGGTAA AAGTTTGGTT CAGTAAAGAG
GATTTTATTC TGCACAATGA TTTAGCCATT GTGCAATGTA ACGTGCATTT TATTGGTGAA
GACGACAGTC ATATTTTTGT GAACAAGAGC TTTGTTTTTA AAATATGTGA CGATGGCAAG
GTACGCATTA TTTTGCATCA ATCATCATTG CCGTATCAGC CTTAA
 
Protein sequence
MFTKEMVHTA LQTWCDNVVK VGKVHSEGGD VQAFSLQVLS ESYDYDNGHV LFKPTLTFGQ 
QTFRPTKEGA LSYFVGGNSE FPDDKGFKLK PWVKVWFSKE DFILHNDLAI VQCNVHFIGE
DDSHIFVNKS FVFKICDDGK VRIILHQSSL PYQP