| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2438 |
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| Symbol | |
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| ID | 4174187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2964439 |
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| End bp | 2965815 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055449 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_662008 |
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| Protein GI | 109898753 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTG AGGCATTAGG CTTGCGTGAT GAGCTCATTC ACGCCATTGC TACACAAGGT
TACTCGGTCG CCACAGACAT TCAACGTGAA GCAATACCCC TTGTGTTAGC TCAACATGAC
CTGTTAGCCG TAGCCCAAAC CGGTACAGGG AAAACGGCGG CGTTTACCTT GCCCTTATTG
CAACGTTTAG CCGCGAAACA AAGCACCAAG GTACAGGGTG TGCGAAGCTT GATTGTTACC
CCAACTCGGG AATTAGCAGC GCAAGTAGCC ATCAGTGTTG AAATTTACAG TACTCAGTTG
AATATTCGCA GCTTTGCGGT TTACGGCGGC GTTAGAATCG AGCCGCAAAT AGCGCAATTG
CAAGAGGGCG TAGACGTGCT GATTGCCACA CCTGGCCGTT TACTTGATTT GTATGAACAG
CGGGCTTTGC ACTTTGAAAA CCTAGAGATA CTCGTGTTTG ATGAGGCCGA TCGTATGCTG
GATTTAGGCT TTATTGATGA CGTAAAGCGC ATTCAATCGC TGTTGCCTGT TAAGCGTCAA
ACGCTGTTGT TTTCAGCTAC TTTTTCAAAA CAGATTAAAC ACTTTGCGAG GGAAATGCTG
AATGCTCCAA AGACGATTGA AGTCAGCGCC GTGAATAGTA CAGTGGATTT AGTCGCGCAA
ACATTCCACC CGATAGAGCA GGCGCGAAAA AGCGCCGCGC TTATCCAACT TATTCAACAG
CACAGATGGT CGCAAACACT AGTGTTTATC CGCACTAAGC GAACGGCTGA CGCACTAGTG
ACTGAACTTG AAGATGCTGG TATTGCTGCT GCATCTATTC ATGCCAACCG AACACAACAT
GCACGTACCC AAGCCTTAAA TGCCTTTAAG GCCGGTGAAA TACAGGTTTT GGTTGCCACC
GATATCGCAG CTAGGGGCAT TGATGTTAGC CAGTTACCCT GCGTTGTTAA TTATGACCTG
CCGTACGTAC CTGAGGATTA CGTGCATCGT ATTGGGCGAA CAGGACGAGC AGGAAATACA
GGGACGGCGA TTTCTCTTTT CAGCCCAGAT GAGATCTCGC AGCTTCAATC CCTTGAGCGC
TATTTAGATC AGCATCTAAA GCCTTCTACT TTGGTTGGTT TTGCGCCAAA AGACCAAGTG
ACAAAGTCAT GGTCAGCCAA CAAAGCCAAC ACACGCGTTA ACAGCGCTGA AAAACCCACC
TCAAGGAATA TGGAAAATAC GAAACATGTG AAGGGCAAAC CCCCTGCAGC CAAGTTAAAC
ATTGATGATG AAGATGATGA ACTGTATGGG AATTTCGAAG CTGACCCGCA TACTTCGAGT
TCACGAAAAC AGCACAAAGG TAGTGCAGGG GGAGCCAAAC GAAGTCGCAG AAAATAG
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| Protein sequence | MSFEALGLRD ELIHAIATQG YSVATDIQRE AIPLVLAQHD LLAVAQTGTG KTAAFTLPLL
QRLAAKQSTK VQGVRSLIVT PTRELAAQVA ISVEIYSTQL NIRSFAVYGG VRIEPQIAQL
QEGVDVLIAT PGRLLDLYEQ RALHFENLEI LVFDEADRML DLGFIDDVKR IQSLLPVKRQ
TLLFSATFSK QIKHFAREML NAPKTIEVSA VNSTVDLVAQ TFHPIEQARK SAALIQLIQQ
HRWSQTLVFI RTKRTADALV TELEDAGIAA ASIHANRTQH ARTQALNAFK AGEIQVLVAT
DIAARGIDVS QLPCVVNYDL PYVPEDYVHR IGRTGRAGNT GTAISLFSPD EISQLQSLER
YLDQHLKPST LVGFAPKDQV TKSWSANKAN TRVNSAEKPT SRNMENTKHV KGKPPAAKLN
IDDEDDELYG NFEADPHTSS SRKQHKGSAG GAKRSRRK
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