| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2435 |
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| Symbol | |
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| ID | 4174184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2962400 |
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| End bp | 2963248 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055446 |
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| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
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| Protein accession | YP_662005 |
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| Protein GI | 109898750 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTG CGGTAACAGC GGCGAGTGGC CAATTGGGCA GGGCGATCGT CAATACCCTT
GTCAAACAAG TTGGTGCAGC AAATGTAGTC GCTTTAGCTA GAACGCCGGA AAAGGCCAGC
GCCCTTGGGG TTGAAGTGCG CCCTGGTGAT TACAATAATT TACCCGAGTT GGAACGCTCA
TTAATGGGTG TCGACACCTT ATTGTTAGTC TCTGGGATGG ATGCGCCCGA CAAACGAATC
GTGCAACATC GCAACGTTAT TAATGCAGCT AAAAACAGCG GTGTTTGCAA AATCGTCTAT
ACCAGTGTGC AAGGAGCGCA GCAAGGCACC GCTTTCTCAC CCGTCATTCA AAGTAATAGG
CAAACAGAAG AAGACGTAAA ATCCAGCGGT TTAGAGTGGG TCATTGGCAG AAACGGTATT
TATATTGAGC CAGATATTGA ATATATCGCA AGCTATAAAA AGGCTGGTAA GGTGACCAAT
TGCGCAGGGC AAGGGCGCTG TGCGTATACA TGTCGGGGGG AGTTAGCGTA CGCGTATGCA
AAAATGCTGA CTGAAGATAA GCATAATGGC CATACCTATA ATTTACATGG TGAATTGTTA
ACCCAGCAGC AACTAGTTGA GCATCTAAAC AAAGCATTTG ACCTTAACCT TCACTATGTC
CCATTGACCT TTGAAGAATA CCAAGCAGAC CGCATGGCTG AACAAGGGGA TTTCATTGGT
ACCGTGATTG CGGGAATTTA CCAAGGTATT GCGATAGGAG CGCTAGAAAA CGAAAGTCAC
TATCAGCAGG CTTGCGGTAG GGCGCACCAA TCATGGCAAG ACTATTTTCT AGCCTCCGTT
AGTGGCTAG
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| Protein sequence | MKIAVTAASG QLGRAIVNTL VKQVGAANVV ALARTPEKAS ALGVEVRPGD YNNLPELERS
LMGVDTLLLV SGMDAPDKRI VQHRNVINAA KNSGVCKIVY TSVQGAQQGT AFSPVIQSNR
QTEEDVKSSG LEWVIGRNGI YIEPDIEYIA SYKKAGKVTN CAGQGRCAYT CRGELAYAYA
KMLTEDKHNG HTYNLHGELL TQQQLVEHLN KAFDLNLHYV PLTFEEYQAD RMAEQGDFIG
TVIAGIYQGI AIGALENESH YQQACGRAHQ SWQDYFLASV SG
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