| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2428 |
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| Symbol | |
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| ID | 4174177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2955356 |
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| End bp | 2955688 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055439 |
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| Product | transthyretin |
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| Protein accession | YP_661998 |
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| Protein GI | 109898743 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2351] Transthyretin-like protein |
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| TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAG CACCGTCACT TTCTAGCCAT GTGCTAGACA CCACCTTAGG CAAGCCTGCG
GCTAATATGC AATTAATACT AACAACACCA GAAGGCAATA TTGCGCATGT GCAAACTGAC
CCAGATGGCC GTTGTAATCA GTGGGGTGAG TTAACGATTT CTGCAGGACA ATACCAACTT
AGATTTCTCA CTGGTGAGTA CTTGTCAGCG GCCCACGGCA GTGCGTTTTA CCCTTTCGTA
GATGTGCATT TTGAAATAAC CGCCGACGGT GGTCATTATC ATATACCGTT GCTCATCTCT
CCATTTGGCT TTAGCAGTTA CCGCGGTAGC TAA
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| Protein sequence | MNKAPSLSSH VLDTTLGKPA ANMQLILTTP EGNIAHVQTD PDGRCNQWGE LTISAGQYQL
RFLTGEYLSA AHGSAFYPFV DVHFEITADG GHYHIPLLIS PFGFSSYRGS
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