Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2412 |
Symbol | |
ID | 4174161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2934804 |
End bp | 2935541 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055423 |
Product | hypothetical protein |
Protein accession | YP_661982 |
Protein GI | 109898727 |
COG category | [S] Function unknown |
COG ID | [COG2859] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.377805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATA CCCAGGACGT GAATACCCAG ACCAGAGGCG CAGCTTTTAT ATTAGGCACG TTTTTGTGTG CCGGGTTGGT TGTACTGGGT TTTCAGATAA GCAGTGCGGT AATCGAGTAC CGTCAATTCG AGCGCAGTGT CACAGTAAAA GGCTTATCTG AACAGGAATA TCCCGCAGAC ATTGTCATTT GGCCAATTCA ATACACGGTA GCGGATAACT CACTTGACGC ACTTTATGCA TCGATTGAAA CCAACACCGG TCTCATTTCA GACTTTTTAC GTCAACATCA CATACCACAG ACTGACATCA GCGTATCCGC GGCGGCCATT ACCGATAAAT CGGCCCAGCA ATACGGCGGT AATGCCACGC CCACCTTTAG GTTCACCGCT GTGCAAACAG TGACTGTCTA TTCTGGCAAC ATCAGTTTGG TGCGCGAGGT CATGGGGAAG CTAACTGAGC TGGGCAAAAA AGGCATAGTA CTTAATCAAA ATAACTATCA AGCCAACGTC GAATATATTT TCACACGTCT AAATGATGTT AAACCTTCGA TGATCGAAGA AGCCACCACA AAAGCCAGAG AAGTCGCCGA AAAGTTCGCT AAAGATTCAA ACAGTGTGCT TGGTAAAATA AAACGTGCCT CACAAGGGCA ATTTAGCATT ACCGCGAGAG ATAGAAACAA CCCCCACATT AAAAAGCTGC GAGTGGTGTC AACAGTAGAA TATTACCTGT CTGATTGA
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Protein sequence | MKNTQDVNTQ TRGAAFILGT FLCAGLVVLG FQISSAVIEY RQFERSVTVK GLSEQEYPAD IVIWPIQYTV ADNSLDALYA SIETNTGLIS DFLRQHHIPQ TDISVSAAAI TDKSAQQYGG NATPTFRFTA VQTVTVYSGN ISLVREVMGK LTELGKKGIV LNQNNYQANV EYIFTRLNDV KPSMIEEATT KAREVAEKFA KDSNSVLGKI KRASQGQFSI TARDRNNPHI KKLRVVSTVE YYLSD
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