| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2408 |
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| Symbol | |
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| ID | 4174156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2931383 |
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| End bp | 2932636 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055419 |
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| Product | hypothetical protein |
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| Protein accession | YP_661978 |
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| Protein GI | 109898723 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATA AACTAAAAGA GCGGTCTTTT TTCGCTGAAA ACTGGGAAGT GGGCCCGATA
CTAAGAGCAT TGCTGCGAAA CAAAGTCGGC GCCATACTGA TTGCTTTGCA AATCGCCTTC
ACCATGACCA TAGTCGTTAA CGCTATCTAT ATTATTCATG AGCGTAGCGA ACAGATGAAA
CGCCCTAGTG GTATCGATGA AGCCAACAGT TTTTATCTTT CAAGCGTTGG CTTTACCCAT
GACTTCAACA CGTTAGTGAC GATCAAAGAA GACTTAAACT TAATTCGATC TCTTGAAGGC
GTGGTGGATG CCATTCAAAT CAACGCCATT CCAATGAGCA ACAGTGGTTG GTCAATGGGC
TTACAAACCC AGCCTGGAGC CGAGTTTGAT GGCACGGGCA GCGCTGTCTA TATGGTCGAC
GAACACGCTT TAAACACCTT GGATGTGGCG TTAGTGGCTG GTGAAAACTT CAGCCCAACC
GACATTCAGA CGCGTGTTGC GAGTCAAAAC CACTGGCCAG ATAAAGTGAT CATCACACTT
GCTATGGCGA ATCGTTTATT CCCGGATGAT GGCTTAGGGG CACTGGGTAA GACGGTGTAC
ATTAACGATA TCGAACCCAT GATAATCACC GGCATTATCG ACAAATTGCA AGCGCCTTGG
GTGGGCTGGG ACAACGTCGA TAATGTGATA CTGACCCCAG AAATTCGCGA TGCTGAAACG
AGCCGCTATT TCATTCGAAC CAAACCCGGC CAACGTGACC GCATTATGAC CGAAGTGGAA
AGTCTGCTAG CGAAAAGTAA CACGGGTCGT ATTGTGCGAG ATATGCGTAG CATTGACGAA
ACGCGAGTTC GCGCCTATCG CGACAACAGT GCAATGATCC GAATTTTGGT GACGGTTATG
GTGGTCTTGG TCATTGTCAC TGGCCTTGGC ATTGTAGGGC TAGCAAGCTT TAGCGTGAAT
CAACGTAAAA AACAGATAGG CACACGTCGA GCCTTAGGCG CCAGTCAGCA AGCGATTGTT
CGCTACTTTA TGTTAGAAAA CTTGCTAATA AGTACTGTGG GTGTGGTCTT GGGCGCAATG
TTAACCATAG GGCTGAATAT CGTGCTGGTA GACGTCTTCA GCCTAAATCC AATGACTTGG
TATTACATCC CTCTAGGCAT GTTAGCGCTT TGGGTTGTGG GGCAATTAGC CGTATATGGC
CCAGCTAAAA AGGCAGCAAA CATTCCCCCA GCGCTAGCCA CGAGAAGTGC GTGA
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| Protein sequence | MMNKLKERSF FAENWEVGPI LRALLRNKVG AILIALQIAF TMTIVVNAIY IIHERSEQMK
RPSGIDEANS FYLSSVGFTH DFNTLVTIKE DLNLIRSLEG VVDAIQINAI PMSNSGWSMG
LQTQPGAEFD GTGSAVYMVD EHALNTLDVA LVAGENFSPT DIQTRVASQN HWPDKVIITL
AMANRLFPDD GLGALGKTVY INDIEPMIIT GIIDKLQAPW VGWDNVDNVI LTPEIRDAET
SRYFIRTKPG QRDRIMTEVE SLLAKSNTGR IVRDMRSIDE TRVRAYRDNS AMIRILVTVM
VVLVIVTGLG IVGLASFSVN QRKKQIGTRR ALGASQQAIV RYFMLENLLI STVGVVLGAM
LTIGLNIVLV DVFSLNPMTW YYIPLGMLAL WVVGQLAVYG PAKKAANIPP ALATRSA
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