Gene Patl_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2399 
Symbol 
ID4174147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2918743 
End bp2919714 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content50% 
IMG OID638055410 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_661969 
Protein GI109898714 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCACA TTCACGTTAC GACTTGGGAA TATTGGGAAG CACACATATT AATGAACACT 
AAAACGATTG CAGCATTACA ACTTGGCTCA TCTGACTTAG GCACGAGCGA CACACTAAAG
CGGATATTGG GCTTTAAAGA CGCCATTATT AATAGCCAGT GTGATGTATT GGTGATGCCT
GAAGCCCTTT TAGGGGGGTA CCCAAAAGGC TCTGATTTTG GCACACGTGT GGGCTATCGC
ACCGAACAAG GGCGTGAACA GTACATGGCT TATTTTAAGC AAGCGGTTGA AATAGATGGC
CCTGAGGTGC AAGCCTTAAT CGAATTAGCG CGTGAATGTA ATACTGCTGT GGTGATTGGC
ATTATTGAAC GGGGCGGCAG TACTTTATAT TGCACCGCGT TATTTATCAC TCAAGCGGGG
GAGGTGCATA AGCATCGAAA ACTCATGCCA ACCGCTAGCG AGCGTCTAAT ATGGGGCCAG
GGCGACGGCT CGACGATCCC TATTGTGGAT ACCTCGGCAG GGCGTGTGGG GGCTGCCATT
TGCTGGGAAA ACTACATGCC ATTGCTTCGC AGCACTATGT ACGCCAAGGG TATGGATATT
TGGTGCGCAC CTACCGTGGA CGACCGAGAT ATTTGGCAGG CAAGTATGCG CCACATTGCC
TACGAAGGAC GAAATTTTCT GGTCAGCGCC TGCCAATATC AAGGGCCACC TAAACCGGGC
GAAATGCTCG ATCATGCATG GCCAGCGGAC AAGCCATTAA TTCGTGGTGG CAGTATGATC
GTATCGCCAA TGGGCGAAAT ACTCGCTGGG CCATTGTATA ACGAAGAAGG CTTGATCAGC
GCTGAAATCG ACTTAGATGA CATTATTAAG GCGCGTTACG ATTTAGACCC TGCTGGGCAT
TACTCGCGCC CTGATGTGTT TAAACTGACG GTGGATGAGC GGCCAAGACC GCCGTTTGAA
GCAGAACAAT AA
 
Protein sequence
MRHIHVTTWE YWEAHILMNT KTIAALQLGS SDLGTSDTLK RILGFKDAII NSQCDVLVMP 
EALLGGYPKG SDFGTRVGYR TEQGREQYMA YFKQAVEIDG PEVQALIELA RECNTAVVIG
IIERGGSTLY CTALFITQAG EVHKHRKLMP TASERLIWGQ GDGSTIPIVD TSAGRVGAAI
CWENYMPLLR STMYAKGMDI WCAPTVDDRD IWQASMRHIA YEGRNFLVSA CQYQGPPKPG
EMLDHAWPAD KPLIRGGSMI VSPMGEILAG PLYNEEGLIS AEIDLDDIIK ARYDLDPAGH
YSRPDVFKLT VDERPRPPFE AEQ