| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2386 |
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| Symbol | |
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| ID | 4174134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2901214 |
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| End bp | 2902296 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638055397 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_661956 |
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| Protein GI | 109898701 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTGGC AGGCGTTATT TGACACCCGT GAACGAATGT TTTGGACGCT ACACACGCTT
GGGTGGTGTG GTTTCGCGGT AATTTATTAT ATAGGTTCTT TCCTGCACGA TATGCGCAGT
ATTTGGCTGT TCGTGATTAT CTTAAATGCC TATGCGGGTT GGTTATTGAC CATTCCTTTG
CGTTACATTT ACGCCCGCGC TATGAAGCTC AGCCCGTTGA AAATGTTGAT GGTGGTGTTC
GTTAGCGTGT ATACGATTGC GCTAATGTGG GCATTAGTGA AAAACATCAA CTATTGGGAA
ATATATAAAA AGGGATATCG TCCTGAAGAA TGGTACATGT ATTTTACCAA TACGGTGAAT
TCCTTAATCA TGATTGGCTG CTGGACTGGG CTCTATTTTG GTATTAAAAA CTACCAAATG
TTGCTTAAAG AAAAACAAAA TAGCCTCAGA GCATCCACCA TGGCGCATCA AGCACACATC
AAGATGTTAC GTTACCAGCT TAATCCGCAT TTTTTGTTTA ATACCTTAAA CGCCATTTCG
ACACTGATTT TAATGAAAGA CAACAAAACC GCTGAGTCTA TGGTAACTCG CCTCAGCGAC
TTTTTGCGCT ATTCCCTAGA TAAAGACCCT ATAAAAAAAG TGCCATTACG CCAAGAAATT
GAGGCATTAA CCCTTTATTT AGCCATCGAA AAAGTGCGCT TTGAAGACCG TTTGACTGTT
ATTTGGGACA TTCAACCCAG TGCAAATGAA GCATTAGTGC CTAGCTTGAT TTTGCAGCCA
TTAATCGAAA ACTCAATTAA ATATGCTATT TCAAAATTAG AAGAGGGTGG CTGTATTGCG
ATTTCAGCTA AAGTATTTGG CCGAGATCTG ATGCTAGAAG TGACCGATAA TGGGCCAGGG
GCGGACATTG AAGAAGGCCA AATGTATCGC GAAAATGGCG TGGGTCTGCA AAATATTCAA
GAGCGTTTGG ACTCGTTATA CAAAAATGAT TTCTCTTTTA GTATTTCTAA TAGCCAGCCT
TCTGGTATAA AAGTGTTTAT TCGTATCCCA TTTGAGACAC AAGAAGCAGT GCATGAAAAT
TAA
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| Protein sequence | MKWQALFDTR ERMFWTLHTL GWCGFAVIYY IGSFLHDMRS IWLFVIILNA YAGWLLTIPL
RYIYARAMKL SPLKMLMVVF VSVYTIALMW ALVKNINYWE IYKKGYRPEE WYMYFTNTVN
SLIMIGCWTG LYFGIKNYQM LLKEKQNSLR ASTMAHQAHI KMLRYQLNPH FLFNTLNAIS
TLILMKDNKT AESMVTRLSD FLRYSLDKDP IKKVPLRQEI EALTLYLAIE KVRFEDRLTV
IWDIQPSANE ALVPSLILQP LIENSIKYAI SKLEEGGCIA ISAKVFGRDL MLEVTDNGPG
ADIEEGQMYR ENGVGLQNIQ ERLDSLYKND FSFSISNSQP SGIKVFIRIP FETQEAVHEN
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