| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2383 |
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| Symbol | |
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| ID | 4174131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2898138 |
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| End bp | 2899307 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055394 |
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| Product | cupin 4 |
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| Protein accession | YP_661953 |
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| Protein GI | 109898698 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2850] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGTAT TTGATAACTT TGATCCAACA CTATTTTTAG ACTCTCACTG GCAAAAACGC
CCAGTCGTGT TTAAAGGGGC ATTTTCGCAA TTTGTAGACC CTCTTGATGA AAATGAGCTC
GCGGGCTTAG CCCAAGACCC AAGGATAGAT TCGCGAATAG TGTCATCTGA AAATGCCAAC
TGGCACGTTC AACACGGGCC AATCAGTGAC TTCGAACATG CCTGCCAAGG TAGCTGGAGT
CTGTTAGTAC AAAGTGTTGA TCAACATGTT GATGAAGCTG ACGCCCTTAT TCGCATGTTT
AATTTTATCC CCTACTGGCG CTTAGACGAT CTAATGGTGA GCTTTTCCAA TACCGGGGCC
GGCGTAGGTC CTCATTTGGA CCAATACGAT GTATTTATTA TTCAAGGTAA AGGCAGCAGG
CGCTGGCAAG CGGGTAAACG AGGCGAGTAT TCAACTTACC ACCCCCATCC AGATCTCAGT
CAAATACAGG GATTTACCCC TATCATAGAT GAGGTACTGC ATTCGGGAGA TATGCTATAT
ATCCCGGCAG GTTGCCCACA TAATGGTGTC GCATTAGAAG ACTGCATGAA TTATTCAGTA
GGCTTTCGCG CGCCGACCCA ACAAGATTTA CTCTCGTCAC TAGCGGATTA CAGTATCGAT
TTAGGCATAT TTAAAAAACG CTACCAAGAC AAAGGATTAA CCCCTAGATT TGATCCCAGT
GAATTAGCAC AAGAGGAAAT ACATAGTTTC CGGAATATGC TGCATGACGC TATCGACTCC
CCTGATTTCA CGCGTTGGCT GACTTCTCAC TTCAGTGATA CTCAACTAAA TCAGGGTTAC
GATGAGCAAC ACAACCCAGA TTATTCTTTA CAAGAAATAT TAGTATTATT CCAACAGCAA
ACAGTGTTTG AGCGTCAACC TGGCATACGC CCTATTTACT TAGCGCAATC GGATGAGAAC
ACATCATTGG AGTTCTTTAT TGAAGGCCAA GCATTTTTTG CTCCACCGGA GCATGCTCAA
GCAGTGCGAG CATTTCTTCA ATCGGCTTCG TGGCAATTTG ATTTGCACAG TGATAAGGGC
ACCGCTGTCA CGATCAATCA CTTTTGGGTA CAGCTTATAA GCGAATTGGT TAACGCTGGC
GCCTGGTTAC CTCAAGAAGA AATGTTTTAG
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| Protein sequence | MYVFDNFDPT LFLDSHWQKR PVVFKGAFSQ FVDPLDENEL AGLAQDPRID SRIVSSENAN
WHVQHGPISD FEHACQGSWS LLVQSVDQHV DEADALIRMF NFIPYWRLDD LMVSFSNTGA
GVGPHLDQYD VFIIQGKGSR RWQAGKRGEY STYHPHPDLS QIQGFTPIID EVLHSGDMLY
IPAGCPHNGV ALEDCMNYSV GFRAPTQQDL LSSLADYSID LGIFKKRYQD KGLTPRFDPS
ELAQEEIHSF RNMLHDAIDS PDFTRWLTSH FSDTQLNQGY DEQHNPDYSL QEILVLFQQQ
TVFERQPGIR PIYLAQSDEN TSLEFFIEGQ AFFAPPEHAQ AVRAFLQSAS WQFDLHSDKG
TAVTINHFWV QLISELVNAG AWLPQEEMF
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