Gene Patl_2373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2373 
SymbolinfA 
ID4172530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2886978 
End bp2887196 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content39% 
IMG OID638055384 
Producttranslation initiation factor IF-1 
Protein accessionYP_661943 
Protein GI109898688 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000287842 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAG AAGATTGTAT TGAAATGGAA GGTACAGTGT TGGATACCCT TCCAAATACT 
ATGTTTCGTG TCGAATTAGA AAACGGTCAC GTTGTTACTG CACATATTTC AGGAAAGATG
CGTAAGAACT ATATCCGCAT CTTAACAGGC GACAAAGTAA CATGTGAAAT GACGCCATAT
GATTTATCTA AAGGGCGTAT TATTTACCGC GCTCGTTAG
 
Protein sequence
MAKEDCIEME GTVLDTLPNT MFRVELENGH VVTAHISGKM RKNYIRILTG DKVTCEMTPY 
DLSKGRIIYR AR