Gene Patl_2368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2368 
Symbol 
ID4172525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2883264 
End bp2883794 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID638055379 
Productprotein of unknown function DUF335, SprT 
Protein accessionYP_661938 
Protein GI109898683 
COG category[S] Function unknown 
COG ID[COG3091] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0781299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACGG CTTCCATCCC CACTACCTCA CTTAATCAGA TAGACATGCA AAGCAATGTT 
GTAGAACGCG TGCGTATTTG CATGGAGCAA GCAAATACGC AACTGCAAAG CAACCTAGCT
ATGCCTAAGA TACACTTTAA CCAAAGAGGT AGAATAGCCG GTTGTGCACG CTTGCAATCG
AACGAGTTGC GTTTTAATCC GGTTCTTTTG ACAGACAATT ACACTACATT CATCAACGAG
GTAGTGCCCC ATGAAGTCGC ACATTTAGTG GTATTTAACC TCTATGGGCG AGTGAAGCCA
CACGGCAAAG AGTGGCGAGG GATAATGCAA CAAATATTTG GGTTAACAGG CCATACCTAC
CATCAAATGG ATGTGACTAA AGTGAGCGGA AAGCGATTTC TCTATCGATG CGCATGTGGT
GAAGTTCAGC TCAGCATAAG ACGGCACAAC AAAGTTAAAC GGCAGCAGCA ACAGTATATT
TGCCGCCAGT GTCATAGCGT GTTGATTTGC GCAGAAACAA AAAACGATTA G
 
Protein sequence
MNTASIPTTS LNQIDMQSNV VERVRICMEQ ANTQLQSNLA MPKIHFNQRG RIAGCARLQS 
NELRFNPVLL TDNYTTFINE VVPHEVAHLV VFNLYGRVKP HGKEWRGIMQ QIFGLTGHTY
HQMDVTKVSG KRFLYRCACG EVQLSIRRHN KVKRQQQQYI CRQCHSVLIC AETKND