| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2348 |
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| Symbol | |
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| ID | 4172502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2857084 |
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| End bp | 2859393 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055356 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_661918 |
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| Protein GI | 109898663 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.574239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGCC CCGTGAAATC AGGTCTAATA TTGCCTGAGA AATACTACCT TGATCATTTT
AACGAGTTCC TCGCTTATAC GCAGACCCAT TGCGCGGCAT TATTATTGCC AGCACATCAC
GATTTTATTC AGCGCTTTGA GCAATTAGCG CACAACACCC AATGCATGTT TGTGCGTGTG
GTAAATCGAA AAGGCCTGTT CATCGCCTGC AGTACCTTAA CCTACGGGGA AATTGAAGAC
TGCCAACGGG AGCTAGCGAT ACTCACTGAC TGTGGCGTGT TACGTTCGGT TGTTACCAGC
GATGTCAGTC CCTTTCTCGA TACGCTGAAC AAGGCGCAAT TGATCGAATT ATTAAGCTCG
CAACAGGTAA CGTTTAAAAA AAGTGCTGCC AAAGCCGTTT TATTAACGCT AGCCCGTACG
CTTAGCGCTG AGGCAATCAC CCAACATACC TTATGCGACG ATTTCAAAGT AAAAACATTC
GTTGATGAGT GGCAATACTT ACTGTTTTTA TTTTTTGGCA ATCTTAATAG CGCGCTAGAC
AAGTTCTCCA TGCGGGACTT GGGCGTCCTT AAAACGCGCA ATAAATCTAA GCAGCAAGGC
CCGCGCTTTG ACGGTATTGA AGAAGCCCAA AGTGCCTTCT ATTTTGCTCA GCAAAAACAG
CGTTTGGGAT CTCTGTGCCC CGAAGGACTG ACTGAATTTG CGCAACAGCA AGAATTGCAA
CAAACGCCCG TGGGGATTAC AGCCAATGAA TATGCTGCAC ACTTTTGGTA CGAGCTGGGC
TGCGCCTTAT TAGCCATTGA TTGTGAGAAC GCTAAAACAC AAGCGCTGGC ATTTTGGCGT
TTATCTTCAC ACCAAAAAGC ACAAGAGCGC TTGATCAGAG AAACCTATAA ATTTGATAAA
GAGCGCGCCA AGTTGGCCCT TGAAGCGATA CTTGATGTAC CGAAAGACGA CGAACTAAGT
TTGTTCGCGT TTGACTTTTA CCAACGTAAG TTCAATCAAG CAAAGTTAAG CGTGCGTACC
CAGCGTTTAC GTGAGCACAG TCACAAACTT TACATTGATG AAGTGTACAA AGATCGCGTG
GAATTAGGCG TAAAACGCTA CTACGAGGGG CAAAATCTAT GCGTGGATAA TGCTGCGCAT
GGGGGTAAAC AGCAAAGCGA GCTTCAGGCT GAATCTCTTG ATCAAACCCC AGCACAATTG
CCGGCAAATA TTTTCGCTTA TAGAACCGAA AATCGCTTAT TCAGGGCACT ATTTGGTTTA
ACGTTTTGGC ATGAATTGTT TAATGAGGCC GAGCGCGCAA CGGGCTCAGA GTTTGACCGC
AGACCACGCC TGATAAAAGA AAACTGTCTG TACGATGAGT TAGGTGCTCA GGTGGAAGCG
CGCTTAGCGC TGTTCACTCA ATGTCAATCT CAACCCCAGC CCCAGCCTCA AAACAAACAC
CAGATAAACA GCGTATCCAG CCATGCCATG GCATACCTGA CGCAAGTTGC AAGTCGATAC
TATGGCCAGC CTAACGGTAT ATTTCGTTGG CACCCCAAGA TGCTTGAGAT CATTGGCGTA
TTCTTACGAC ATGTAAACGG GCAATGGGTA GCGGACCACT TAAGAGCAAT GGCGAAAAAC
TACCAAGGGT TAAAAGATGG TTACCCAGAT TTAATGGTGA TTGAAAATCA GCAACTGCGC
TTTGAAGAGG TGAAAGCGCC GGGGGATCAA CTTCGCGCCA ATCAGCTGGT GAGTATCGAC
GCATTGCAAA ATGCCGGGTT TAACGTCGGG GTGTGTCAAG TAGAGTGGCG TTATAACCCC
CAACAACCCT ATGTCGTGGT TGACGTTGAA ACGACAGGAG GATGCAAGCC GGGGCATCGC
ATTACTGAAA TCGGCGCGGT TAAAGTGATT GACTCCAAGG TGGTCGACAG CTGGAGTAGC
CTTATCAACC CTGAAAGACG GGTGCCGCAT TTTATTACCC GTTTGACGGG GATCAGTAAT
GATATGGTCG AAGACGCGCC ACTTTTTTGC GAAGTCATAG ATGATTTAGA GGCGTTTATG
CAAGACTGTA TTTTCGTGGC TCACAACGTG AATTTCGACT ATGGCTTTTT TAAGTTGGAA
TACGGGCGAT TAGAAAGAGC GTTCTCTATG CCTAAGCTAT GCACAGTGCG CGAAATGCGT
AAGTATTATC CTGGCTCACC ATCTTATTCG TTGGGTAAAT TAAGCAAAGA ATACGGATTG
TCTCTTGATA ATCATCACCG AGCCTTATGT GATGCTCAAG CTGCTGCTGA GCTACTGATC
ATGGTGAACG AGAAAAAACA CACAGTATAA
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| Protein sequence | MQSPVKSGLI LPEKYYLDHF NEFLAYTQTH CAALLLPAHH DFIQRFEQLA HNTQCMFVRV
VNRKGLFIAC STLTYGEIED CQRELAILTD CGVLRSVVTS DVSPFLDTLN KAQLIELLSS
QQVTFKKSAA KAVLLTLART LSAEAITQHT LCDDFKVKTF VDEWQYLLFL FFGNLNSALD
KFSMRDLGVL KTRNKSKQQG PRFDGIEEAQ SAFYFAQQKQ RLGSLCPEGL TEFAQQQELQ
QTPVGITANE YAAHFWYELG CALLAIDCEN AKTQALAFWR LSSHQKAQER LIRETYKFDK
ERAKLALEAI LDVPKDDELS LFAFDFYQRK FNQAKLSVRT QRLREHSHKL YIDEVYKDRV
ELGVKRYYEG QNLCVDNAAH GGKQQSELQA ESLDQTPAQL PANIFAYRTE NRLFRALFGL
TFWHELFNEA ERATGSEFDR RPRLIKENCL YDELGAQVEA RLALFTQCQS QPQPQPQNKH
QINSVSSHAM AYLTQVASRY YGQPNGIFRW HPKMLEIIGV FLRHVNGQWV ADHLRAMAKN
YQGLKDGYPD LMVIENQQLR FEEVKAPGDQ LRANQLVSID ALQNAGFNVG VCQVEWRYNP
QQPYVVVDVE TTGGCKPGHR ITEIGAVKVI DSKVVDSWSS LINPERRVPH FITRLTGISN
DMVEDAPLFC EVIDDLEAFM QDCIFVAHNV NFDYGFFKLE YGRLERAFSM PKLCTVREMR
KYYPGSPSYS LGKLSKEYGL SLDNHHRALC DAQAAAELLI MVNEKKHTV
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