Gene Patl_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2339 
Symbol 
ID4172493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2845918 
End bp2846784 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content45% 
IMG OID638055348 
Productputative esterase 
Protein accessionYP_661910 
Protein GI109898655 
COG category[R] General function prediction only 
COG ID[COG2819] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0989572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAATT GGATAGCGAG TTTGAGTCGT CTGTTGTTTT TAGTGATGGG TATGGTGTTC 
ACGTTTTTCG TACTATCTGG TTGCGGCGAA GTTATTCAGC GCCCGACGTC GGCCGCGTCG
AATGTATCTG TATTACCTTA TCCGTTTTTA ATACCTGAAC TGGATCGCCA AAGAACTGTT
CGCCTTTATC TACCGCCGAA TTATGAGCAT GAAACTCAGT CATACCCTGT TATTTACATG
CATGACGGAC AGAACCTGTT TGATAATGCC ACGGCTTACG CTGAAGAATG GGGAGTGGAT
GAAAGTCTAA ACGCGCTGGC TAAAACATCA GGACGAAAAT TTATCGTTGT TGCCATCGAT
AACGGCGGTG ATTTTCGGAT GAATGAGCTT AGTCCATGGG CCAATAAACG CTTTGGGGAA
GCACAAGGAA AAGCATATAT GCAGTTGATT GTGGATGTAG TGAAACCTTA TATCGACAAC
AACTATCGCA CTAAAGTCGA TGTAAAAAAC ACCGCGATGA TGGGCAGCTC AATGGGCGGC
TTAATCACCC ACTACGCCAT ACACAATTAC CCAGATGTGT TCGGCAAAGC CGCTATTTTT
TCTCCCTCTT ATTGGTATTC GCAAGATGTG TTCAGTGATA CCAGGCTACA TAGAAGCAAA
GATTCCGCTC GTCTATACGT GTTATACGGC AGTAATGAGG GCGACGGGAT GATTGCTGAT
ACAGACAAAA TGCAGCGATT GATTAAAGAG CAGGGTCACC CTCGTGAAAA CATGCAATTC
GTATCCATCG CTGGTGGGCA ACACAATGAA CAACTTTGGG GTGATTCATT TACCGATGCG
ATTGAATGGC TGTTTGAGAT ACATTAG
 
Protein sequence
MRNWIASLSR LLFLVMGMVF TFFVLSGCGE VIQRPTSAAS NVSVLPYPFL IPELDRQRTV 
RLYLPPNYEH ETQSYPVIYM HDGQNLFDNA TAYAEEWGVD ESLNALAKTS GRKFIVVAID
NGGDFRMNEL SPWANKRFGE AQGKAYMQLI VDVVKPYIDN NYRTKVDVKN TAMMGSSMGG
LITHYAIHNY PDVFGKAAIF SPSYWYSQDV FSDTRLHRSK DSARLYVLYG SNEGDGMIAD
TDKMQRLIKE QGHPRENMQF VSIAGGQHNE QLWGDSFTDA IEWLFEIH