Gene Patl_2335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2335 
Symbol 
ID4172489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp2841058 
End bp2841696 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content46% 
IMG OID638055344 
Productmetal dependent phosphohydrolase 
Protein accessionYP_661906 
Protein GI109898651 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTAT TCGTGGTCAA AATGGCTGAG TTCATAAAAG TAGAAATGGA CACCGACGCC 
GCCCATGATT TTCAACACGT TAAGCGGGTT GTTCTAAATG CGAAACAGTT ATGTGAAGCG 
GAAAAGGCTG ACGAGTGGGT TGTTATGCCC GCGGTGTGGT TACATGATTG TGTGACTTTG 
CCAAAGGATC ATCCTGAGAG AGCGTCAAGC TCACGCTTAG CGGCGGATAA AGCGGTGACC 
TTCTTATCCG AAATTGGCTA CCCAAAAACG CATTTTGACC ATATTCATCA CGCTATTGTT 
GCACATAGCT ACAGTGCTAA TGTCGCACCT AAAAGCTTAG AAGCTTGCGC GGTGCAAGAC 
GCTGACAGAC TAGACGCCAT TGGAGCGATA GGTGTTGCAA GATGTTTGCA AGTGGGTACC 
TCGATACAGC GCGATTTTTA CGAGCCTGAT GATCCTTTTG CTTTGTATAG AGATGTCGAT 
GATTCACAGT TTACTCTTGA TCATTTTTTT CAAAAATTGC TCAGGATAGA GGAAATGCTT 
CACACCGAGG AAGCGAAAAG AGAAGGGCGG ATCAGAACTG ATTTCATGCA TCACTATTTA 
CGTCAATTGC GTCACGAAAT GGGTTTACTG CGGCGGTAA
 
Protein sequence
MDLFVVKMAE FIKVEMDTDA AHDFQHVKRV VLNAKQLCEA EKADEWVVMP AVWLHDCVTL 
PKDHPERASS SRLAADKAVT FLSEIGYPKT HFDHIHHAIV AHSYSANVAP KSLEACAVQD 
ADRLDAIGAI GVARCLQVGT SIQRDFYEPD DPFALYRDVD DSQFTLDHFF QKLLRIEEML 
HTEEAKREGR IRTDFMHHYL RQLRHEMGLL RR