Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2325 |
Symbol | |
ID | 4172479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2828902 |
End bp | 2830371 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638055334 |
Product | Na+/solute symporter |
Protein accession | YP_661896 |
Protein GI | 109898641 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00258865 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCA GCATGTTGTT CATTGTTTTA CTTTATGAAA TTGTCACTAT CTGCGGCGTC GCCCTTTGGT TGAAACGCGG AAAAAGTCAA TCCACGCATA ATGACAGTGA GTTTGCACTA GGTGGTCGCA GCCTACCTGT GGGAGTGGTT GCGGCCACCA TGGCACTGAC CGTGCTGGGT ACAGCACATA TATTAGGCGT GTTTGAAATG GTTTGGGGAG TGGGTGCAGC TGCTATTTGG TTTAGTATCG CTCATGTAAT TTTACTGGTT GTGGTGTGTT ACAGCACTGG GTTGTGGGTG CGCCGTCTTA GAGTGACAAC AGTGCCAGAA CTGCTAGAGC ACCTTTTCGG CAAAGGGATC AGAGTGCTCG TTTCCTGCGT TATGGCCGGG ATCATTTTTG GTATTCTAAC CATAGAGACT CAAGGGCTTG GCATCATCAT TAATGCGATG ACAGGCTGGG GTATCACCAA TGGGGCCATA GCGGGTGGGG TTATCGGCAT ATTCTACGTT GTGCTAGCGG GTATGAAAGA AGTCGGTTGG ATCAACCTCA TCAATGCGGT TGTTATGTAT GTCGGGCTTA TTTTAGCCAC AATTTTTATG GCCTTGCGTC TACCTGGCGG TAATTTTGAT TCAGTGGCTG AGCATTTTGT ATCACAAGAC ATGGATTACA TGATATCCGT TTTTGGCAAC TCACAAATTT TGATGACCTT TACCCTGGGC ATGGTGGTTG CGGTACTGTT TAGCCAATCA GTGAATCAAA TGCTATTACA AACGGCCATG TCCGCCAAAG ATGAGAAAAC GATTAAAAAA GCACTGTGGA TAGCAGCGCC CGTTAATGGT TTATTTGGTG TTTTTGCAGT GGTGCTGGGC CTTACCGCGA TGACTATTCC TGAATTTGCC GAACTCGGGC CGAAAAAGGC CGCCACCCAA ATGTTAGTAG AATACCTTCC TCCTTGGTTA GGAGCATTAC TGTTAGCGTC ATTTCTAGCA GCCATTTTAT CGACTTTCGC TATGACAGCA CTCAGCCCAG CCACTATTTT TAGTAATGAT ATTTATAAGG GGCTATTTAA ACCTGACGCG ACCGAAGCGC AAATGACCAA GGTGACCCAG ATTGCGATTG TGGTATTGGC CAGTATTGCT ATCGCGGTGG CATCATTTTT ACCGCCTATA TTAGCCGCAA TGACCTGGTT ATTTGCCTGG TTAATACCCG TATTCTTCAT CATCATCTAC GGCTTGTTCT GGCAGCGCAG CGCACTGGCG GCACTCATTA CATTGGTCAC CGTGTGGGCG GGCAATTTTT TATGGTCTTT TTCAGATATT GCTTTGAACC TTGGATTACT CAAGAGCAAT GCAGTTATGG CGTTGACCGC CTCTATCGCA GTGGGATGTG TGGCAAATCT TCTGATTAAA GGTGAAAAAG CTTACTTCAA AAGCCAAACT TACCTTGACC TAAAAACAAC AAGTAATTAA
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Protein sequence | MKTSMLFIVL LYEIVTICGV ALWLKRGKSQ STHNDSEFAL GGRSLPVGVV AATMALTVLG TAHILGVFEM VWGVGAAAIW FSIAHVILLV VVCYSTGLWV RRLRVTTVPE LLEHLFGKGI RVLVSCVMAG IIFGILTIET QGLGIIINAM TGWGITNGAI AGGVIGIFYV VLAGMKEVGW INLINAVVMY VGLILATIFM ALRLPGGNFD SVAEHFVSQD MDYMISVFGN SQILMTFTLG MVVAVLFSQS VNQMLLQTAM SAKDEKTIKK ALWIAAPVNG LFGVFAVVLG LTAMTIPEFA ELGPKKAATQ MLVEYLPPWL GALLLASFLA AILSTFAMTA LSPATIFSND IYKGLFKPDA TEAQMTKVTQ IAIVVLASIA IAVASFLPPI LAAMTWLFAW LIPVFFIIIY GLFWQRSALA ALITLVTVWA GNFLWSFSDI ALNLGLLKSN AVMALTASIA VGCVANLLIK GEKAYFKSQT YLDLKTTSN
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