| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2321 |
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| Symbol | |
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| ID | 4172475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2825740 |
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| End bp | 2826651 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055330 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_661892 |
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| Protein GI | 109898637 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000070783 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTCCT CATCTCACAT TACGGTTATT GGCGCAGGGC TTATGGGCTG TGGCATCGCG
CAAGTATTTG CCAACAAAGC AATACAAGTC ACCTTGTACG ATCCGATTGA AGGTGCTCGC
CAAACCGCAA AACAAAAAAT TGCGGCCAAT TTGACCGCCC TATCCCAATC CTTGAGTACG
CTCGATTTCA TTCACATCAG CGACGACTTA GAGACCGCCG TCGCCGATGC CGATTTTGTG
ATTGAAGCGG CGCCCGAAAA ACTACCGTTA AAGCGACAGA TATTTACAGA TATTCTGCGT
CATGCACGAC CAGACACCAT TCTGGCCAGC AACACATCCG TGATCCCCAT CAAGGAGATC
TTTGAAGGCT TGGACTGTAA TGAGCGGATC GTAGGTTGCC ATTGGTGGAA CCCACCTTAT
TTAGTGCCGC TTGTAGAAGT AGTACAAAGC GAACAGTCGT CTCTGGCCAC GGTTGAAAGC
ATGATGTCGC TGTTAGCCTT CGCGGGGAAA AAACCAGTAC ATATCCATAA AGACGTTCCA
GGTTTTGTAG GTAATCGCAT GCAGCATGCC TTATGGCGAG AAGCAATAGC GCTAATTAAT
GACGGGGTAT GCACGGCCGA AGGTATAGAC ACAGTCGTGA AAAATAGCTT TGGTCTGCGA
ATGCCCGTGC TTGGCCCAAT TGAAAATGCC GATTTGGTAG GCCTGGACTT AACCTTGGAC
ATTCATAATG TCATTTTGGC CAGCATCAAC CGCGATACCG TCCCTTCTGA CATCCTTAAA
AGCAAGGTTG AAAAAGGTGA ATTAGGAATA AAAACCGGCC AAGGCTTTAA ACGTTGGACT
GACGAAAGCG CCCAAACCCT GCGAGAAAAT CTGAGCAAAT ATTTAGTCAA TACCGTGAAT
TCTAAAGGAT AA
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| Protein sequence | MFSSSHITVI GAGLMGCGIA QVFANKAIQV TLYDPIEGAR QTAKQKIAAN LTALSQSLST
LDFIHISDDL ETAVADADFV IEAAPEKLPL KRQIFTDILR HARPDTILAS NTSVIPIKEI
FEGLDCNERI VGCHWWNPPY LVPLVEVVQS EQSSLATVES MMSLLAFAGK KPVHIHKDVP
GFVGNRMQHA LWREAIALIN DGVCTAEGID TVVKNSFGLR MPVLGPIENA DLVGLDLTLD
IHNVILASIN RDTVPSDILK SKVEKGELGI KTGQGFKRWT DESAQTLREN LSKYLVNTVN
SKG
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