| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2320 |
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| Symbol | |
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| ID | 4172474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2824739 |
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| End bp | 2825614 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055329 |
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| Product | putative cyclase |
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| Protein accession | YP_661891 |
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| Protein GI | 109898636 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1878] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000962152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTA ATGACATAAA ACGAGTACAC AGAATTCCAA AAGTTGACAT GGATAAAATG
ATCGATGAAG AAAATAAAAG TAACGACACC GGGATGCAGT TTTACGACCT AAGCCATGAA
TGGGGTTTGG GACAGCCTTG TTGGCCTTAC TTTGAAGATG TCAAAATCGA GCGTCTTCAT
GGTCATTCTC GTTCAGGGGT TCTGACGCAA AAAATCACCA CAGTAATGCA TTCAGGTACC
CACATTGACG CCCCAGCTCA CGTGGTTGAA GGCACCCCAT TTATGGATCA AATGCCACTG
CCAAGATTCT TCGGTGCAGG TGTTGTGGTG TCTATTCCCA AGAAAAAGTG GGAAGTCATT
ACAGCTGAAG ATCTTGAAAA CGTTCGTCCT AAAATACGCG AAGGCGATAT CGTTATTATC
AATACAGGTT GGCACCATAC CTATGCTGAT TCTGCTGAGT ATTATCATTA TGGCCCAGGA
CTGTACCGTG AAGCGGGCGA GTGGTTAGCA AAGAAGAAAG TCAAAATGGT CGGTATTGAT
GTGCAAGCAC TTGATCATCC GCTGGGTACG GCTATCGGTC CACATGGCAC AGGACCTCTT
ATTCCTCATC TTGAAGACGA GTACCGTGAA TTCACCGGCG GTCGTGGCAT TAAAGAAGAT
TTTCCTGATT GGGAGCCGTG CCATAGAGCC CTGTTGAACA GTGGTATTTG CGGCATTGAG
AATGTGGGTG GCGAACTAGA CAAAGTCACT GGCAAGCGCT GCACTATTGC TGCATTCCCA
TGGCGCTGGA AAGGCGGCGA CGGTTGTATG GTGCGCCTCG TGGCGATGGT TGACCCTAAA
GGTGAGTACC GTATCGAGCA AGGAGACACA GAGTAA
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| Protein sequence | MKINDIKRVH RIPKVDMDKM IDEENKSNDT GMQFYDLSHE WGLGQPCWPY FEDVKIERLH
GHSRSGVLTQ KITTVMHSGT HIDAPAHVVE GTPFMDQMPL PRFFGAGVVV SIPKKKWEVI
TAEDLENVRP KIREGDIVII NTGWHHTYAD SAEYYHYGPG LYREAGEWLA KKKVKMVGID
VQALDHPLGT AIGPHGTGPL IPHLEDEYRE FTGGRGIKED FPDWEPCHRA LLNSGICGIE
NVGGELDKVT GKRCTIAAFP WRWKGGDGCM VRLVAMVDPK GEYRIEQGDT E
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