Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2303 |
Symbol | |
ID | 4172457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2803538 |
End bp | 2804794 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638055312 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_661874 |
Protein GI | 109898619 |
COG category | [R] General function prediction only |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.214194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGCA CAACGATTTC AAGACAAAGA TGCATCATAG TCGGTGCGAG TCATGGCGGT GTTAACCTAG CGTTTGCCCT ACGTAAAGAG GGTTACGAGG GGCGTATTAC TCTTATTGAT GCAGACTGTA ACCTGCCATA TCACCGGCCG CCTTTATCAA AAACACACTT GATTGCAAAT GAACCTGCTG GCCAGTTGCT AAAACCAGAA CAAGGTTATC AAAAAGCAGA CATTAGCTTG ATGCTAGGGG TGAGCGTGGT GGATGTTAAA AGTAAGAACA AACAGGTTTT GCTTGATGAT GGTACGCGCC ATCCGTACAC CCAGTTGGTA TTAGCCACTG GGGCAAGCCC GATCACTCCA CCCATCCCTG GGATTGACTC TGCTAAGCAC CTTTACACTA TTCGTACCGC AGATGATGCA CATGCCATTG CTACCGCGTT TAAACAAAGT GAGCAAAAAC GCGTTGTTGT GATAGGCGGA GGTTATGTGG GACTCGAAAC TGCCGCTTCG TTACGAAAAT CTGGCGCGGT AGTGACAGTG CTAGAGAGAG AGCCTCGGTT ATTGGCGAGG GTGACTGCAC CTATGATGTC TGACTACTTT TATGCCTTGC ATCGCCAGCA TGGCGTAGAG GTACATAATG ATAAAAACGT CAGTGAGATA AAAACAAACG CAAATGAGAA TAGCGTTGTC TGCAGTGATG GTAGCGAATA CCCTGCGGAT ATCATCATAG TGGGCGTGGG TGTGCGAGTG AACACTGCTT TAGCGGATAA AGCCAATTTG GAGATCAACA ACGGCATAGT GGTTAATGAA GCTAATCAAA CCAGTGCACA GGATATATTT GCTATCGGTG ATTGTTGCGC CCAGTTTAAC CCGCATTACC AACGATGGTT GCGACTTGAA TCAGTGCAAA ATGCGTTAGA CCAAGGGAAA GTGGCCGCCG CTGCTATCTG CCATAAAGCA TTCAAAACTC AGCCTGTGCC TTGGTTTTGG TCGGATCAAT ATAATATTAA GTTGCAAATG GTGGGCTTAT CACAAGGCTA CGATGATGTT GTCATGCGCA AAGAGTTAGA TAAACCTGAT AGTTTCTCGG TTTGGTATTT TAAAGGGAAT GAGTTGTTAG CCGTAGATGC CGTCAATAAT GCCAAAGCTT ATGTCTTGGG CACAAAATTT ATTAACGCCA TGGAACAGGT AGATAAAAAT AAACTCACGG ATAATAGCGC GCCTTTGTCA GCGTCTATCA TCAAAGAGTT CGCTTAG
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Protein sequence | MTSTTISRQR CIIVGASHGG VNLAFALRKE GYEGRITLID ADCNLPYHRP PLSKTHLIAN EPAGQLLKPE QGYQKADISL MLGVSVVDVK SKNKQVLLDD GTRHPYTQLV LATGASPITP PIPGIDSAKH LYTIRTADDA HAIATAFKQS EQKRVVVIGG GYVGLETAAS LRKSGAVVTV LEREPRLLAR VTAPMMSDYF YALHRQHGVE VHNDKNVSEI KTNANENSVV CSDGSEYPAD IIIVGVGVRV NTALADKANL EINNGIVVNE ANQTSAQDIF AIGDCCAQFN PHYQRWLRLE SVQNALDQGK VAAAAICHKA FKTQPVPWFW SDQYNIKLQM VGLSQGYDDV VMRKELDKPD SFSVWYFKGN ELLAVDAVNN AKAYVLGTKF INAMEQVDKN KLTDNSAPLS ASIIKEFA
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