Gene Patl_2303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2303 
Symbol 
ID4172457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2803538 
End bp2804794 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content46% 
IMG OID638055312 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_661874 
Protein GI109898619 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.214194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGCA CAACGATTTC AAGACAAAGA TGCATCATAG TCGGTGCGAG TCATGGCGGT 
GTTAACCTAG CGTTTGCCCT ACGTAAAGAG GGTTACGAGG GGCGTATTAC TCTTATTGAT
GCAGACTGTA ACCTGCCATA TCACCGGCCG CCTTTATCAA AAACACACTT GATTGCAAAT
GAACCTGCTG GCCAGTTGCT AAAACCAGAA CAAGGTTATC AAAAAGCAGA CATTAGCTTG
ATGCTAGGGG TGAGCGTGGT GGATGTTAAA AGTAAGAACA AACAGGTTTT GCTTGATGAT
GGTACGCGCC ATCCGTACAC CCAGTTGGTA TTAGCCACTG GGGCAAGCCC GATCACTCCA
CCCATCCCTG GGATTGACTC TGCTAAGCAC CTTTACACTA TTCGTACCGC AGATGATGCA
CATGCCATTG CTACCGCGTT TAAACAAAGT GAGCAAAAAC GCGTTGTTGT GATAGGCGGA
GGTTATGTGG GACTCGAAAC TGCCGCTTCG TTACGAAAAT CTGGCGCGGT AGTGACAGTG
CTAGAGAGAG AGCCTCGGTT ATTGGCGAGG GTGACTGCAC CTATGATGTC TGACTACTTT
TATGCCTTGC ATCGCCAGCA TGGCGTAGAG GTACATAATG ATAAAAACGT CAGTGAGATA
AAAACAAACG CAAATGAGAA TAGCGTTGTC TGCAGTGATG GTAGCGAATA CCCTGCGGAT
ATCATCATAG TGGGCGTGGG TGTGCGAGTG AACACTGCTT TAGCGGATAA AGCCAATTTG
GAGATCAACA ACGGCATAGT GGTTAATGAA GCTAATCAAA CCAGTGCACA GGATATATTT
GCTATCGGTG ATTGTTGCGC CCAGTTTAAC CCGCATTACC AACGATGGTT GCGACTTGAA
TCAGTGCAAA ATGCGTTAGA CCAAGGGAAA GTGGCCGCCG CTGCTATCTG CCATAAAGCA
TTCAAAACTC AGCCTGTGCC TTGGTTTTGG TCGGATCAAT ATAATATTAA GTTGCAAATG
GTGGGCTTAT CACAAGGCTA CGATGATGTT GTCATGCGCA AAGAGTTAGA TAAACCTGAT
AGTTTCTCGG TTTGGTATTT TAAAGGGAAT GAGTTGTTAG CCGTAGATGC CGTCAATAAT
GCCAAAGCTT ATGTCTTGGG CACAAAATTT ATTAACGCCA TGGAACAGGT AGATAAAAAT
AAACTCACGG ATAATAGCGC GCCTTTGTCA GCGTCTATCA TCAAAGAGTT CGCTTAG
 
Protein sequence
MTSTTISRQR CIIVGASHGG VNLAFALRKE GYEGRITLID ADCNLPYHRP PLSKTHLIAN 
EPAGQLLKPE QGYQKADISL MLGVSVVDVK SKNKQVLLDD GTRHPYTQLV LATGASPITP
PIPGIDSAKH LYTIRTADDA HAIATAFKQS EQKRVVVIGG GYVGLETAAS LRKSGAVVTV
LEREPRLLAR VTAPMMSDYF YALHRQHGVE VHNDKNVSEI KTNANENSVV CSDGSEYPAD
IIIVGVGVRV NTALADKANL EINNGIVVNE ANQTSAQDIF AIGDCCAQFN PHYQRWLRLE
SVQNALDQGK VAAAAICHKA FKTQPVPWFW SDQYNIKLQM VGLSQGYDDV VMRKELDKPD
SFSVWYFKGN ELLAVDAVNN AKAYVLGTKF INAMEQVDKN KLTDNSAPLS ASIIKEFA