| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2286 |
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| Symbol | |
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| ID | 4172440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2783347 |
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| End bp | 2786061 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055295 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_661857 |
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| Protein GI | 109898602 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAA CTGACACGGA TATTGCACAA TCTACATGGC ACAGTACCTC GGCTGAGCAA
ACGCTTAAAA GCGTAGAAAG CTCGACGAAC GGATTAACAC AAGCTGAGGC TGAAGCTCGT
TTGTTAACTC ATGGTGCTAA CCGTTTGCCA CAAGCTGTCC GCAGCAACGC GTTCGTACGT
TTTTTAATGC ACTTTCATAA TATTCTGATT TACGTGTTAA TCGGTTCTGC AGTGATTACC
GCTGTGCTTG GGCATTGGAT TGATATGAGC GTTATTTTAG CGGTGGTTAT TGCGAATGCT
GTGATTGGCT TTATTCAAGA AGGCAAAGCA GAACAAGCGA TGAACGCTAT AAGGCAGATG
CTAGCGCCTC GAGCCAACGT GATCCGTGAC GCAGAGCGCA CCAACGTTGA TGGAGTAGAT
TTAGTTCCTG GTGACATAGT GTTACTTGAA GCTGGTGATA AAGTGCCTGC CGACCTCAGA
ATGCTCTCCG CTTATGGTTT AACAATTCAA GAAGCGATTT TAACTGGTGA ATCACTGCCA
GTCGAAAAGC AAAGTAAGGT CGTTGAAATC GGTGCGTCAC TCGGTGATCG CACTTGCATG
GCTTATTCAG GAACACTAGT CAGTACGGGT CAAGGCAAGG GTGTAGTGGT CGGTACAGGA
AAAGACACAG AAATAGGTCG TATTAGCGGC TTGTTGTCAA AAGTAGAAAC GTTAACCACG
CCTCTAGTTG AGCAAATGGC GGTGTTTGCC AAGTGGTTGA CAATTATGAT CCTTGCCGTT
GCCTCCGTGT TACTGGTGTT TGGGTATTTT GTTGAACACC ATAACTTTAC TGAAATGTTT
TTAGCAGTAG TGGGGCTATC GGTAGCAGCA ATTCCAGAAG GTTTACCGGC GGTTCTAACC
ATAACGTTAG CCATTGGTGT TAAAGCCATG GCTCAACGAA ATGCCATAGT GCGTCATTTA
CCCGCGATTG AAACCTTGGG TTCAGTATCC GTTATTTGTT CTGACAAAAC AGGCACATTA
ACTCGCAACG AAATGATGGT GGCTTCAGTA CTCACGCAGC AACACTTACT CACCTTAGGA
GGCAATGGCT ATGAACCTAA AGGTAAGTTG ACCCTAGAAA CTAAAGCCGT GGCTATTACT
GATTTTATAC CTAATGAATT GGCGCAAGCT GCCGCGCTAT GTAATGACGC CGCTCTGCGA
GAGCAAGACG GAAACTGGCT AGTCGAAGGA GATCCTATGG AGGGCGCGTT ACTCGCTTTT
AGCGTAAAAA TGACCCTCAA CCTAAAAGAA ATTAACGCTA CCTGGCCCCG AACAGACGCC
ATACCGTTTG ATGCTAAACA TCGATTTATG GCTACGCTGA ATCACAATCA TGAGCAACAA
GCCTGCATAT TTGTAAAAGG TGCCCCAGAA CAAATTTTGG CCATGTGTAC ACATCAAAAA
GGCTTAAACG ACAAATCAGA GCCAATAGAT ATAGCCTACT GGAACAACCA AGCTGAGACT
ATCGCTGGAC TTGGCCAACG TGTATTAGCG TTTGCCATCA AAACAGTGAC ACCATCACAC
ACCGTTTTAG AGCATGCTGA TGTCACAGGC ACATTAACAC TGATTGGTAT GTTAGGCATG
ATAGACCCTC CTCGTACAGA AGCGATTAGC GCAGTTGCAC AATGTTTCGA AGCCGGTATT
CGCGTTAAGA TGATAACTGG TGACCATAGC AAAACTGCAG CAGCTATCGG TAAGCAAATT
GGCTTACAAA TTACCGATAA AGTACTAACT GGTGTGGAAC TTGATGGTAT GGACGAAAGC
GCGATACGAA ATGCTGTTCT TGGATGCGAT ATTTTTGCCC GCACCAGCCC AGAGCACAAA
CTACGATTAG TAATGGCACT GCAATCTCAT GGTATGACAG TAGCGATGAC TGGAGATGGC
GTGAATGACG CTCCCGCGTT AAAACGAGCC GATGCGGGGA TTGCGATGGG CCAAAAAGGC
AGTGAAGCTG CTAAAGAAGC TGCAGAGTTA GTGCTGGCCG ACGACAACTT TGCATCTCTC
GTATCTGCAG TGCGCGAGGG ACGGACCGTC TACGACAACC TCAAAAAAGT CATCAGTTGG
ACACTACCCA CTAATGCGGG TGAAGCCATG ACTATCATTG TCGCATTGTT AATGGGCATG
ACGTTGCCTA TTACCCCTAT TCAAATCCTC TGGGTCAACT TAATTACGGC AATAACACTT
GGCATAGCGT TAGCATTCGA ACCGAGCGAA GAAAGCACGA TGCGCCGCCC TCCTCGAGGG
CGTAACGAAC CTCTGTTGTC TAGAGAAATG ATCTGGTATG TAATCTTAGT TTCTGTTTTA
TTCCTATGCG GTGTGTTTGG TATTCATATG TACGCCGTTG ATCGCGGCTA TTCTCTAGAA
CTAGCTCGAA GCATGGCTTT GAATACCTTA GTTGTAATGG AAATTTTTCA ATTGTTTTTC
ATTCGCAATA TCTACTCTAC ATCATTAACT TGGCAGGCTG TATGCGGTAC TAAGGTAGTC
TGGTTAGTTG TATCGATTAT TACTGTGGCG CAATTTGCCA TAACCTATTT TCCCCCCTTG
CAAATCGTAT TTGCAACAGA AGCGATCCCT TTATTCGATG GTTTACCGAT CATAGGTGTA
GGTATCACCC TGTTCGTTAT TCTTGAAATA GAAAAACAGA TGAGGCTTTC GATGCAGCGA
ATTAAAGCTA CCTGA
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| Protein sequence | MQKTDTDIAQ STWHSTSAEQ TLKSVESSTN GLTQAEAEAR LLTHGANRLP QAVRSNAFVR
FLMHFHNILI YVLIGSAVIT AVLGHWIDMS VILAVVIANA VIGFIQEGKA EQAMNAIRQM
LAPRANVIRD AERTNVDGVD LVPGDIVLLE AGDKVPADLR MLSAYGLTIQ EAILTGESLP
VEKQSKVVEI GASLGDRTCM AYSGTLVSTG QGKGVVVGTG KDTEIGRISG LLSKVETLTT
PLVEQMAVFA KWLTIMILAV ASVLLVFGYF VEHHNFTEMF LAVVGLSVAA IPEGLPAVLT
ITLAIGVKAM AQRNAIVRHL PAIETLGSVS VICSDKTGTL TRNEMMVASV LTQQHLLTLG
GNGYEPKGKL TLETKAVAIT DFIPNELAQA AALCNDAALR EQDGNWLVEG DPMEGALLAF
SVKMTLNLKE INATWPRTDA IPFDAKHRFM ATLNHNHEQQ ACIFVKGAPE QILAMCTHQK
GLNDKSEPID IAYWNNQAET IAGLGQRVLA FAIKTVTPSH TVLEHADVTG TLTLIGMLGM
IDPPRTEAIS AVAQCFEAGI RVKMITGDHS KTAAAIGKQI GLQITDKVLT GVELDGMDES
AIRNAVLGCD IFARTSPEHK LRLVMALQSH GMTVAMTGDG VNDAPALKRA DAGIAMGQKG
SEAAKEAAEL VLADDNFASL VSAVREGRTV YDNLKKVISW TLPTNAGEAM TIIVALLMGM
TLPITPIQIL WVNLITAITL GIALAFEPSE ESTMRRPPRG RNEPLLSREM IWYVILVSVL
FLCGVFGIHM YAVDRGYSLE LARSMALNTL VVMEIFQLFF IRNIYSTSLT WQAVCGTKVV
WLVVSIITVA QFAITYFPPL QIVFATEAIP LFDGLPIIGV GITLFVILEI EKQMRLSMQR
IKAT
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