| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2284 |
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| Symbol | |
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| ID | 4172438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2780382 |
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| End bp | 2782100 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638055293 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_661855 |
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| Protein GI | 109898600 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.608384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATG ACATGAATTT AATCGAACTT ATTGGTCAGT CCTCTTTTAC AGAAATTGCA
GTGCTTTTAG TGCTGGCTGC TTCATTGGGT TTTGTCGGCT TACTGTTGCG ACAACCTCTC
ATTGTTAGTT TTATTGCCGT CGGTTTAATT GCCGGGCCTT CAGTGCTCGA TATCGTGCAT
TCTAAAGATC AAATCACTCT TTTGTCTGAA CTAGGCATAG CGATCTTGCT CTTCCTTGTT
GGAATTAAGC TAGATGTAAA GTTAATTAAG TCTATTGGTG GGGTTTCGGT TTTAACGGGG
CTAGGCCAAG TTATTTTTAC GTCCCTGATT GGTTATTTGA TCGGTTTATG GCTTGGACTT
GGTTACATTA CTAGCCTTTA TGTCGCCGTT GCGCTTACAT TTTCTTCTAC CATTATTATC
GTAAAGCTTT TATCTGATAA ACGAGAAATA GAATCCTTAC ACGGTCAAAT TGCTTTAGGT
TTTTTGATTG TGCAAGATTT GGTAGTGGTA GTCGCGATGA TAGTGTTAGC GACTATTGGT
ATTGGATCTA GTGGGCATGG TGATGCAAAT AACTCTTCAG TTTGGCACGT TGCTATATCA
GGATTGAGTT TACTGGGTTT TGTGATTGTA TTTGTACGCT ACATTGCGAA TCCTTTAACG
GAAAAACTCG CTAAAGCGCC TGAATTATTA GTTATTTATG CCATTGCACA AGCAGCATTG
TTTGCAGCCA TAGGAGATAT AGTCGGTTTG GGCATGGAAG TCGGGGGCTT GCTGGCCGGC
GTGGCATTAG CGTCAACACC TTATCGGGAA AGCATCGCAG CAAGACTCGC TCCTTTACGT
GATTTTTTGC TGTTGTTTTT TTTCATTGCT CTAGGGGCCA CATTAGACTT ATCAAAGCTT
GGCACTCATT TACCGGCAGC TATTATTTTC TCACTGTTTG TTTTGTTTGG TAATCCACTT
ATTGTCATGT CGATTATGGG GCTGATGGGA TATGGCAAAA GAACGGGTTT CCTAGCCGGC
TTAACGGTTG CTCAGATTAG TGAGTTTTCG TTAATCTTTA TCGCCATGGG CATAGGGTTA
GGCCATGTGC CGCAGGACAT TTTAGGTTTA GTGACGCTGG TGGGTATTAT CACTATTGGG
GTTTCAACCT ATATGATTAC TTATTCACAC CAACTCTATT CTTTTTTTGC TCCGTTGTTA
GGTAAGTTCG AGCGCTCGGG CATACCTCGA GAGGCCTCTA CCGATGAGAA CTCAGGCAAC
CAATATCCAG TTATCATCTT TGGTTTAGGA AGACTGGGAA CGGCTATTTC AATGCAACTC
AAAAATGAGG GGATTAAAGT CTTAGGTATC GACTTTAATC CGGCGGCGAT TAAACATTGG
CATCAATTGG GGTTGGATTG TAATTTCGGG GACGCAACAG ACGCCGAATT TATCATTGAA
CTGCCTCTCA AACATGCACA ATGGATTGTG TCGACTATTC CTCATCTCCA CACTGGCTTA
TCCTCTGAAG ATAATCGAAA AACGGTTATT CAGTTAACAC GTTCAGCGGG CTACACAGGG
AAGTTAGCCG TTATTTCACA AGGTCGTGCC GAAACCGAAG AATTAAACTT ACTCGGTGTT
GAATTGGTGC TCGAGCCTTT TCAAGATACT GCAGACCGAG CCGTTCGCAT ACTTTATGAA
GGTCTTGATA TTAACGCCAC TCAACAAGAA AAGGGATAA
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| Protein sequence | MSDDMNLIEL IGQSSFTEIA VLLVLAASLG FVGLLLRQPL IVSFIAVGLI AGPSVLDIVH
SKDQITLLSE LGIAILLFLV GIKLDVKLIK SIGGVSVLTG LGQVIFTSLI GYLIGLWLGL
GYITSLYVAV ALTFSSTIII VKLLSDKREI ESLHGQIALG FLIVQDLVVV VAMIVLATIG
IGSSGHGDAN NSSVWHVAIS GLSLLGFVIV FVRYIANPLT EKLAKAPELL VIYAIAQAAL
FAAIGDIVGL GMEVGGLLAG VALASTPYRE SIAARLAPLR DFLLLFFFIA LGATLDLSKL
GTHLPAAIIF SLFVLFGNPL IVMSIMGLMG YGKRTGFLAG LTVAQISEFS LIFIAMGIGL
GHVPQDILGL VTLVGIITIG VSTYMITYSH QLYSFFAPLL GKFERSGIPR EASTDENSGN
QYPVIIFGLG RLGTAISMQL KNEGIKVLGI DFNPAAIKHW HQLGLDCNFG DATDAEFIIE
LPLKHAQWIV STIPHLHTGL SSEDNRKTVI QLTRSAGYTG KLAVISQGRA ETEELNLLGV
ELVLEPFQDT ADRAVRILYE GLDINATQQE KG
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