| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2274 |
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| Symbol | |
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| ID | 4172428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2766266 |
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| End bp | 2767375 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055283 |
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| Product | (S)-2-hydroxy-acid oxidase |
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| Protein accession | YP_661845 |
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| Protein GI | 109898590 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG ATCATTACGT GTTACCTAAA CTAAGTCAAA TTCCAGCCGA TGTGATTGCT
ATCAGTGATT ATGAACGTTT AGCGAAAGAC TATATGCCTC ACGGTATTTA TGAGTATATT
GCTGGCGGAG CAGGGGACGA CATTACCCTG AATCGGAATA GGACTGCATT TGATGCTATC
GGCATGAATA AACGCGTGTT GCGTAAATTT TCCAAAGGCA CCACGGAAAT TGCCTTGGGC
AGAGACCGGT TTAGTTGGCC AATGTTGATT GCCCCTTTAG CGTATCAAAG CTTGTTGCAC
CCACAAGGTG AATTAGCCAC AGTGGAAGCG GCTAACGCGG TTAACATGGG GATGCTAACC
AGCACCTTGT CGACCTTTCC ACTTGAACAG ATCAGCGCTG CGCAACATAC AGGTAAATGG
TTCCAGCTTT ACATGCAGCC GGATCCAGAG CATACACTTG ACTTGGTAAG ACGAGCAGAA
AAAGCGGGTT ATACCTCCAT AGTGGTGACC GTAGATGCTC CTGTAAGCGG CCTTCGTAAT
CGCCAGCAAA GAGCTGGTTT TTCATTACCC CCCAGTGTGG TGGCAGCAAA TTTGGTAAAT
TATCCCACCT CAAAGGCACA GTCATTATCG CCTGGACAAA GTGTGTTACT CAACGGTTTG
ATGGCTGATG CGCCCGATTG GGATGACATT CAATGGCTGC GCACCAATAC GCACTTACCT
GTTTGGATAA AGGGCATTAG CCATCCACAG GATGCCTTGT TAGCGGTCGA AAGTGGTTGC
GCGGGTATTG TGGTTTCGAA CCACGGCGGG CGCACGCTAG ACGGCCTTGC CCCGAGCATT
GATTTGTTAC CGCCAGTACG AAGCGCGGTA GGTGAGGCAT TTCCCATACT GTTAGACAGT
GGCATTCGCC GAGGTACCGA TATTTTTAAA GCCATAGCCC TAGGTGCTAA CGGTGTATTA
ATTGGCCGCC CCGTACTAAA TGGCCTGGCT GTTGCAGGAG CACTGGGAGT TGCCCATAGT
CTGACCTTAC TTCAGCAAGA GTTAGAGCTT GCAATGGCAT TAACCGGATG TGAAACCATC
AGTGATATTA CCCTAGATTG CATTTATTAA
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| Protein sequence | MKKDHYVLPK LSQIPADVIA ISDYERLAKD YMPHGIYEYI AGGAGDDITL NRNRTAFDAI
GMNKRVLRKF SKGTTEIALG RDRFSWPMLI APLAYQSLLH PQGELATVEA ANAVNMGMLT
STLSTFPLEQ ISAAQHTGKW FQLYMQPDPE HTLDLVRRAE KAGYTSIVVT VDAPVSGLRN
RQQRAGFSLP PSVVAANLVN YPTSKAQSLS PGQSVLLNGL MADAPDWDDI QWLRTNTHLP
VWIKGISHPQ DALLAVESGC AGIVVSNHGG RTLDGLAPSI DLLPPVRSAV GEAFPILLDS
GIRRGTDIFK AIALGANGVL IGRPVLNGLA VAGALGVAHS LTLLQQELEL AMALTGCETI
SDITLDCIY
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