Gene Patl_2255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2255 
Symbol 
ID4172409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2741552 
End bp2742547 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content47% 
IMG OID638055265 
Productaldo/keto reductase 
Protein accessionYP_661827 
Protein GI109898572 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAGC GGCAATTAGG TCAACAAGGG TTAACGGTGT CCAGTATCGG TTTAGGGTGT 
ATGGGAATGT CAGATTTTTA CGGCACCCAT GATCGCGAGC GTTCATTTGC AACTTTAGAG
CAAGCCGTCA ACAGTGGAGT CACTTTCTGG GATACATCCG ATATTTACGG CCCAAAAACT
AATGAGCAAC TTATTGGAAC GTTCTTTAAA CAGCACAAAG GCGCGCGAAG CAAGATCACA
TTAGCCACTA AGTTTGGCAT TATGCGCGAT GATGCGGGCG GTTTTCTAGG ATTTAATGGC
CATCCTGACT ATGTGAAACA GGCTTGTGAA GCAAGCTTAA AACGATTGGG TACAGATTGT
ATTGATTTGT ACTACCAGCA CCGTATGGAT CCTAACGTCC CGATCGAAGA TACCGTCGGT
GCGATGTCTG ATTTGGTTAC TCAAGGAAAA GTGAGGTTTC TGGGGTTATC CGAGGCGGGC
AGTGATACGC TAAAGCGTGC TCATGCTGTG CATCCTATCA GCGCATTGCA GAGCGAATAT
TCATTATGGA GCCGAGACAT TGAAACGAAT ATCTTACCAA CTTGTGATGA GCTTGGAATA
GGATTAGTCG CATACAGCCC GTTAGGCCGC GGTTTTCTAA CTGGAGCCAT CACGTCACGT
GATGACTTGG AGGCGGGTGA CTGGCGCCTA ACGAATCCGC GTTTTTCAGA ACAAAACTTC
GCCAATAATT TGGCTCTTGT GGATGCGATA CATCATATTG CACAATCGTT AAATTGTACG
CCGGCGCAAT TAGCCTTAGC GTGGATAGCT GAGCAAAGCC CACATTATGT GTCTATACCT
GGTACTCGAG CCCCCTCAAG AGTTGTTGAA AACGCTTCAG CCGCAGAATT AATCATTAGC
CAGCAACAAT GGGTAGACAT CAATCTTAAA ATTGAACGCT GCCAAGTATT TGGAAAGCGA
TATACAGACG AAGCAATGGC AGCGCTGGGG CAATAG
 
Protein sequence
MHKRQLGQQG LTVSSIGLGC MGMSDFYGTH DRERSFATLE QAVNSGVTFW DTSDIYGPKT 
NEQLIGTFFK QHKGARSKIT LATKFGIMRD DAGGFLGFNG HPDYVKQACE ASLKRLGTDC
IDLYYQHRMD PNVPIEDTVG AMSDLVTQGK VRFLGLSEAG SDTLKRAHAV HPISALQSEY
SLWSRDIETN ILPTCDELGI GLVAYSPLGR GFLTGAITSR DDLEAGDWRL TNPRFSEQNF
ANNLALVDAI HHIAQSLNCT PAQLALAWIA EQSPHYVSIP GTRAPSRVVE NASAAELIIS
QQQWVDINLK IERCQVFGKR YTDEAMAALG Q