Gene Patl_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2254 
Symbol 
ID4172408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2741107 
End bp2741541 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content43% 
IMG OID638055264 
ProductMarR family transcriptional regulator 
Protein accessionYP_661826 
Protein GI109898571 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCGC ACTTTATAGA GCATATCTTT GCTATTTCAG AACGTTACCG AATCACGATC 
AGGGCAGCCA TAGATGCGAA CGAGTTGGGC ATAGGTGCGA TGCACGTAAG AAGCTTGACG
GTAATAGCAG AAACACCAGA CTGTACTGCA AATCATATCG TAACCACACT GAGCCGCGAC
AAAGCACAAG TCGCTCGGCT GGTAAAAGAG TTACTCGCAG CTGGATTGAT AGAAAAAAAC
GCCCATCCTG AAGATAAGCG CAGCCAAATT TTAACGTTGA GTAGCGCTGG TAAAACATTG
ATGACACAAC TCAAAGCTTC GAAAAAAACA ATACAGTCAC AAATGACCCA GGGGTTAAGT
CCTCAAGAAA TTGACCTTTT TGACACTATT GCCCATAAAA TAGCCGACAA TTTAGTACGT
GAAGATACAC TCTAG
 
Protein sequence
MHSHFIEHIF AISERYRITI RAAIDANELG IGAMHVRSLT VIAETPDCTA NHIVTTLSRD 
KAQVARLVKE LLAAGLIEKN AHPEDKRSQI LTLSSAGKTL MTQLKASKKT IQSQMTQGLS
PQEIDLFDTI AHKIADNLVR EDTL