| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2245 |
|---|
| Symbol | |
|---|
| ID | 4172397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 2721172 |
|---|
| End bp | 2724873 |
|---|
| Gene Length | 3702 bp |
|---|
| Protein Length | 1233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638055253 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_661817 |
|---|
| Protein GI | 109898562 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.217804 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGGT TACACCGCAT CATTCTAATT AATTGTCACC TTCCTGGTTT TGTTGAACTT
GACGTATCTG GTCACAGTAA TATCTGTGGC ACCAATGCAT CGGGTAAAAC CACTTTGCAA
CGCCTGATCC CCGTTTTTTA TGGCGAGCTT CCCAGTAAAG TGGTGCCCAA GACCCGTAAA
AAATTCGATG AATTCTATTT GCCTCACGCC AATAGCTATT TAATTTACGA ATATCAGCGC
GAAGACGGTC AAGAATGTCA GGTGGTGTTA ACGCGCAAAG GCAGTGATGG GGTGCAGTAT
CGTCTTATTG ATGCGCCCTA TAAGAGCGAG CAAATTCTTG TTGAAATGGA AAACGGCGAA
GCGCAAGCGA TGCTGCCAGA GCAATGGATT AAGCAGCTCA GGCAATTACA AATAGACTTC
TCTCATAAAA TTCAAGCCAC CAGTGAATTT CGCGGCATTA TTCAAAACGA TGCCAGTGTG
GGTGGAACAG GACGTGAAAA CACCAAGTTA AGGCAACTGG CAAGCCGATA CAGCTTGGTG
TCTAGTGCGC ATCGTATACG CCACATGGAA AAGCTAGTCA GTGCGGTACA TGCTAAAGAA
GGCAAGATGG ATACTCTGCG TACCATGCTG GCAGCCATTT TTGAAGAAGA TGGTTTAGTA
CAACCCACCA CGACAGTAAA AAACACCAAA GCCCGTGAGT GGATCACCCA AATGCGCCAA
ACCATGCGTT TGCAAAGCAT GCAGGGTGAC TACGAAAAAA TTCAGGAGCA AACAGAGCAG
CTCAATGTCA TTGAACAGCA ATTGTTGTTA CTGAAGCCGT TACTGGAACA AGACTTACAG
CACCTAACCA CAGAAAAAGC CGATGGGCAG GAACAGAAAA ACAACTATAA AACCCAGCAA
CGCGCTGAAA AAGATATCTT CGAGCAAGCA GAAGGTGAAC TGAACAGCCG GCTCAGTGAA
ACCAACGAGC AATTATCCGC CAAATCCTCT CGTTTAGATC ACCTGCAGCA GCAGTACGAA
AAGTACCAAG ACTCAGATAT AGAACAGCTG CAAAAAGACA TGGATGCATT ACCCCTAACG
CGGGAAGAAT ACGAGCAAAC GTTAGAGCAA TACAACTTAC TCATAGAGCA ACACAAAGAT
CTGCAAAGCC AACTTGAGCA GCAGAAATTT AAATTATCTG AGTCATTAGA GCGCCTATCT
CGTAAAAATC AGGCAAGCGT GAAGGTCATC AGGCAGCAAA AAGAAACTGT TCGTCAAACC
CATCATGAAA AAGAAAGCGC TCTGCGCAGC CAATTCGAGC AGCGTAAAGA GCAGCAAGGG
TCAGAGTTTG AACAACAGCT GATGGACGTT GAGCGCAGTA TTGTGCGCCA AGAGCACCAA
GCGAAGCACG CTTCTGCCAC CGATGAAGAA ATGGAAAATG GGGCGCTGGC CGATAAACGT
TTAGAGCTCG CCCAGCGAGC ATGGCAACAA AGCTCTGGTG CTAAAAAACA AGCTGAAGCT
TTGCATCAGC AGTGCCAGCA CAAACGTGAT GAAGCTGACA AAACGCTACA CAGAGCCCGT
CTTGCTACCC GCCAAAGTAA AGATCATCTA CAACAATTGC ATAAGCAGCT TTCCCCTGAG
CAAGACAGCC TACGTCAATT TTTACGAGAC AATAAACCCG GTTGGGAGCA ATCCATAGGG
AAATTGATTG TCGAGCCTTT GCTTGAGCGA AAAGATCTTT CCCCTAAGTT AGTAGAGACC
TCAGACGAAC AACATTTATT GGGTGTGCAA TTAGATACCT CAGTGATTGA TGCCCCCGCT
TATGCCCAAG ATGAAACCGC ATTGCGCGTG GCGCTTCAGC AAGCAACTAA ACACTTATTA
GCAGCCGAAA AAGAACAAAA AAGCGCTGAA GCAGAGCTTG ATCAATTGCA TCAAGAAGCT
GAAATGCAGC GCGAAGTAGT CGCAGAGCGC AATCGTGCCT TTGAGCAAGC TGAACAAGAA
GTCAGTTACG CCCAAAGCGC TAAGCAGCGT TACTCAGACG AGCTCAAAAT CGTCCTACAA
AAACGTCGTC AACAAGCACA AGCGGCCCTA GACACGTTAC TGCAAGAGAA AAAGCAAATA
CTTGAGCAAA AAGCTGACGC CATTGCCTTG CTTAAATCCG ATTACGACGA GCAGTTGCTT
GAATTTAAAT CTGGTTGGCA AGATGAAGTG GCTGTGCTTG ATGAGCAAAT AGATGAATTA
GAAAAGCAAG TTGAGCAGAA ACGTCAGCAA AATCGTGAGC AAATTAAACA GCTTGAAGAG
GCATTTAACC AAGAGCTTGC TAACAAAGAT ATCGACCCAA ATACCCTCAA GGCACTCAAA
CAGAAAACCG AAAGCCTAAA AAGCTTAATT CAAACGGTGA CCAGTCGCCG CGAAGAGCTA
AACGAATATA AAGCATTTAT GCAGTCAGAT TGGCTGAAAC AACGCCCAAT GTTACTTGAG
CAAGAAGCCG AGCTTAAAGC ATCTGCACAG CAACTAACTC AGCAACAAAG TACGCTGCAA
CGTCAATACC AAAACAAACG CACTGAGTTA AGCCAAGCCT TGTCAGCGAT TGAAAAACGC
TTATCGGCCT GCAGTGCATT GATCACCGAA ATTGAACCTA TGGTGCGCCA ATTAGCCAAT
ATTGCCTTTT CATTTAAAGC GAATGATGAA AGCGATATTA ATTTAGGCGA TCAAGCCGAG
CGTATTAGTC GCTGTACCGA GGCGCTTGAG AGTCGCAGCC GCGGTGAGAA AAAACTTAAA
GAGGCTTTGT CAGAGTTTGA AGCGAATCTC GGCAAAGATG CCGGCAAAGA CTTTTTAGAT
ACCATGCTAC AAGCGTTTAG CGTGCTTGAT GAAGATGCCA ACGTGCGTGA CCGCCTACCT
ATTTTGCAGC GTTTATTGAG TATTTTAGCC TCTCGTCAGC GACAAATCGT TGAGCAGGGT
GAAACCATAG GCGGGGATTT AAATAAATTC TTTACTGTGT TTAGCGATAT TAACCGTAAG
ATCTCACTGC AGAGTAAACG CCTCACCGAC GAAGTATCAG ATGATTTGAC CCTAGATGGG
ATCGCCCGCT CAGAGGTAAA GATTATCTCC ACCGTGGATG AACTGAATTT CTGGACTCCT
CTTAAACGCT TTGCCGAGCA GTATGATAAC TGGAATAAAT CCGATGCCTT TTTGCCCAGT
GAAACCTACT TAGATACTTT AGCCGATGTG GTTGAAGTGC TGCCAAACGA TGCCAATTAC
AGCATTGAGT CTTTGCTGCG ATTAGAGCTG CACCTAAATG AAGGCGGCTC AGATTTAGTG
ATTAAAAATG ACAGGCAATT ACTGGAGTCA TCCAGTCATG GTATGGCGTA TTTGATTTTG
TGTAAGTTCT TATTGGCTTT TACGCGTTTG CTAAGAAACC AAGCGAATAT TGATATCCAT
TGGCCTATCG ATGAAATTGG TACGCTTGCC TATCACAACG TTGAAAAGCT GTTCGCTGCC
TGTGATACCA ATCACATCAA TATTTTAGGG GCGTTTCCTA ACCCTGAGTC TGATGTATTG
ATGTTGTTTA AACACAGATA CTTAATCGAT AAGCAGCGCC AACGCCTTGA GAAGATAGAG
CCTAAGCTCA GTCGTATTGC TGAACGCTTG CAACAAAATA GCCTATCCAG CAGCAATGCT
AACCACACAG CAGATAACAA AAATCCACAG GTGACAGCAT GA
|
|---|
| Protein sequence | MPGLHRIILI NCHLPGFVEL DVSGHSNICG TNASGKTTLQ RLIPVFYGEL PSKVVPKTRK
KFDEFYLPHA NSYLIYEYQR EDGQECQVVL TRKGSDGVQY RLIDAPYKSE QILVEMENGE
AQAMLPEQWI KQLRQLQIDF SHKIQATSEF RGIIQNDASV GGTGRENTKL RQLASRYSLV
SSAHRIRHME KLVSAVHAKE GKMDTLRTML AAIFEEDGLV QPTTTVKNTK AREWITQMRQ
TMRLQSMQGD YEKIQEQTEQ LNVIEQQLLL LKPLLEQDLQ HLTTEKADGQ EQKNNYKTQQ
RAEKDIFEQA EGELNSRLSE TNEQLSAKSS RLDHLQQQYE KYQDSDIEQL QKDMDALPLT
REEYEQTLEQ YNLLIEQHKD LQSQLEQQKF KLSESLERLS RKNQASVKVI RQQKETVRQT
HHEKESALRS QFEQRKEQQG SEFEQQLMDV ERSIVRQEHQ AKHASATDEE MENGALADKR
LELAQRAWQQ SSGAKKQAEA LHQQCQHKRD EADKTLHRAR LATRQSKDHL QQLHKQLSPE
QDSLRQFLRD NKPGWEQSIG KLIVEPLLER KDLSPKLVET SDEQHLLGVQ LDTSVIDAPA
YAQDETALRV ALQQATKHLL AAEKEQKSAE AELDQLHQEA EMQREVVAER NRAFEQAEQE
VSYAQSAKQR YSDELKIVLQ KRRQQAQAAL DTLLQEKKQI LEQKADAIAL LKSDYDEQLL
EFKSGWQDEV AVLDEQIDEL EKQVEQKRQQ NREQIKQLEE AFNQELANKD IDPNTLKALK
QKTESLKSLI QTVTSRREEL NEYKAFMQSD WLKQRPMLLE QEAELKASAQ QLTQQQSTLQ
RQYQNKRTEL SQALSAIEKR LSACSALITE IEPMVRQLAN IAFSFKANDE SDINLGDQAE
RISRCTEALE SRSRGEKKLK EALSEFEANL GKDAGKDFLD TMLQAFSVLD EDANVRDRLP
ILQRLLSILA SRQRQIVEQG ETIGGDLNKF FTVFSDINRK ISLQSKRLTD EVSDDLTLDG
IARSEVKIIS TVDELNFWTP LKRFAEQYDN WNKSDAFLPS ETYLDTLADV VEVLPNDANY
SIESLLRLEL HLNEGGSDLV IKNDRQLLES SSHGMAYLIL CKFLLAFTRL LRNQANIDIH
WPIDEIGTLA YHNVEKLFAA CDTNHINILG AFPNPESDVL MLFKHRYLID KQRQRLEKIE
PKLSRIAERL QQNSLSSSNA NHTADNKNPQ VTA
|
|---|
| |