Gene Patl_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2242 
Symbol 
ID4172394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2718367 
End bp2719275 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content45% 
IMG OID638055250 
Producthypothetical protein 
Protein accessionYP_661814 
Protein GI109898559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACT CATTGATGCC TAAGGCCAAG CTGCTGCTCA AAGAACAGTA CTTTGCTTTA 
TTGCATGATG AGCAGACCCG CACCAGCAAA ACAGCCACAG TCAGCCATAT TATGGCCTGG
TGCGAGCAAG AATTTATTCA GCCTGGGCAA TGGTTAAATA AGCAAAAGCA CTTCCGTTTT
ACTCGTCATG GCATTGAGGC CATACGCGAC AATTATTTGC TGAGTGTGGG TGAGGATATT
TTTGCTGATT TTAGTGAGGA TATACATCAA AGTGCAGCCT TAAAAAGCAC AGATGAAAAG
CAAGGGCGAA TAAAACCCAC GCAATCGTTA GTGCTGTGTG CGCTGTCTCA TCAAGCGCCT
TTGTTATCAA ATGACATGCA AACACTCAAC GCGTTTAATC AGCAGTTTTA CCCGTGTGAG
CAAGTTAATG TAGAACTGGA TTTAGCTAGG CTGAATTTAG CGGATTTCGA CAACCTGCTG
GTCATCGAAA ACCGCGATAG TTTTAATGAT TGGCATCGCT TTCAAGGGCA GGTGACGCAA
AAACTAACTA AGCTTTTGGT TATTTACCGT GGTGACAGTG AACACAGCAG CAGTACTAAG
GCGTTACTCG AACATTGGCA ACACGCGCGT CCCCGTTGCC CAAGGATTTA TTTTGGCGAT
TTCGATTTAG CAGGCATGCG CATTGCGGTA TCGGGCCAAT ATTCCCATCT TTTGCTGCCA
GAAGTAGATT GGCTAACATC ACATTTAGTT AAACAACATT ACCCAGATGT ACAACTCAAA
TTTCTAGCAA ATTTATCGCT GCACTGCCCA CAACAATGGC AACATTTGTT GTCGGTGATG
CAGCAGCAGC GTGCAGGCCT GCGCCAGCAA ATGATGTATC AAACGGCATT GGTGCTTTAT
CCGTGTTGA
 
Protein sequence
MTDSLMPKAK LLLKEQYFAL LHDEQTRTSK TATVSHIMAW CEQEFIQPGQ WLNKQKHFRF 
TRHGIEAIRD NYLLSVGEDI FADFSEDIHQ SAALKSTDEK QGRIKPTQSL VLCALSHQAP
LLSNDMQTLN AFNQQFYPCE QVNVELDLAR LNLADFDNLL VIENRDSFND WHRFQGQVTQ
KLTKLLVIYR GDSEHSSSTK ALLEHWQHAR PRCPRIYFGD FDLAGMRIAV SGQYSHLLLP
EVDWLTSHLV KQHYPDVQLK FLANLSLHCP QQWQHLLSVM QQQRAGLRQQ MMYQTALVLY
PC