| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2240 |
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| Symbol | |
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| ID | 4172392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2715793 |
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| End bp | 2717100 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055248 |
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| Product | hypothetical protein |
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| Protein accession | YP_661812 |
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| Protein GI | 109898557 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTAGCT ATTACTGCCG CTTGGCAATA AACAGTATTT TTCGCTCTAA AATACATAGC
GCGTTAACCA TGCTAACCAT TGCCTTGGGG ATCGCAGCTT GCACTATTAC ACTAACGCTT
GTTACTAGTA TGTCAGCAAA CCCAATAGCC CATAAAAGTG CACAATTATT TCGCGTTCAA
CTGGATAATT GGGATCCGAA TCAAGCCGCT GTGGCGCCCA ACCTTCCCCC CGAACTTGTG
ACCTGGACAG ATGCCAATAA TATCGTACAG GCAAAATACG CTAAGCGGCA AAGCGCCAGT
GCCATTACTT GGGGTATGGT GAACCCTGCA AAGCAAGGTT TAACACCTTT TTTGGCGGTG
ATGCGCGTGA CCAGTAAAGA CTTTTTCCCT ATGTTCGATG TGCCGTTTAT TTACGGTGCG
GGCTGGGATG AAAGTGCCGA GCACAATAAT GATTACGTGG TGGTTCTGAG TAAAGAGACT
AACCAACGGG TGTTTGATGG CGCTAACTCC GTGGGGCAAA CCTTGACCAT GCTTGGTGCC
ACCTTTACGG TTGTTGGCGT TTTAGACGAC TGGCATCTTT CACCGAAATT TTACGACATG
TCTTACGGTG CATTTAGCGA CCCTGAAGAG ATGTATCTCC CGCTGGGTTT GAAAGCGGAA
TTCGAATTGC CCCACGGCGG CATAACCAGT TGTTGGAAGG CGGTGGAAAG TGAGCGCTAC
GATGCATTTT TGAATTCAGA ATGCGTCAAT TTTCAACTTT GGGTGGAGCT TGATGATCCT
AACGAGCTGT CTAAATTCAG TCTCTTTTTG ACAAACTACG TCGAACAACA AAAGTCTCTG
GGCCGCTTTC CGCGCCCGCT TAACAATCGC TTGTTAAACG TAGAGCAGTG GCTTGATTAC
AAACAAGTGG TTAAACAAGA TGTGCAAGTC ATGTTTTGGC TGTCGTTAAT GTTTTTGCTG
GTTTGCCTGA TCAATGCTGC AAGTTTACTC AGTGCAAAGC TACATGCCAA GCACAGTGAA
ATAGGCCTGC GCCGAGCCCT TGGTGCTAAT TTTGGCCAAA TTGTTATGCA GTATTCACTA
GAAATTATAT TAATAGGTTT TTGTGGCGGC GTATTGGGTG TCTTTTTAGC AGTAGTTGGC
TTGCAAGGTG TTGCTGCACT TTATGCCGGA TACGGCCATT TAGTTCACTT GAATATCACC
ATCGCCAGCG GTGTGATTGC ATTAGCAGTG TTAGGCACTA TCGTAGCCGG CCTTGTCCCC
GTGTATACAG CGTGCAGGCC GATGCCCGCT ATGCAAATCA AGCAATAA
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| Protein sequence | MFSYYCRLAI NSIFRSKIHS ALTMLTIALG IAACTITLTL VTSMSANPIA HKSAQLFRVQ
LDNWDPNQAA VAPNLPPELV TWTDANNIVQ AKYAKRQSAS AITWGMVNPA KQGLTPFLAV
MRVTSKDFFP MFDVPFIYGA GWDESAEHNN DYVVVLSKET NQRVFDGANS VGQTLTMLGA
TFTVVGVLDD WHLSPKFYDM SYGAFSDPEE MYLPLGLKAE FELPHGGITS CWKAVESERY
DAFLNSECVN FQLWVELDDP NELSKFSLFL TNYVEQQKSL GRFPRPLNNR LLNVEQWLDY
KQVVKQDVQV MFWLSLMFLL VCLINAASLL SAKLHAKHSE IGLRRALGAN FGQIVMQYSL
EIILIGFCGG VLGVFLAVVG LQGVAALYAG YGHLVHLNIT IASGVIALAV LGTIVAGLVP
VYTACRPMPA MQIKQ
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