| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2235 |
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| Symbol | |
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| ID | 4172387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2707796 |
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| End bp | 2710864 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055243 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_661807 |
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| Protein GI | 109898552 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTTA CGGAATTTTC TTTTAAACAT CAGAAATTGG TACTGATGAT CGTTGCTATT
TTACTCATCA ATGGCGTCAT CTCCTACTTC ACCCTGCCTG CACGTGAAGA TCCAAGCATC
ACTATTCGTG AAGCAATTGT AAGTACTGCG TACCCTGGTA TGTCGCCTGA TCGTGTCGAG
CTATTGATCA CCAAAACACT AGAGGAAGAA ATCCGCAAAA TACCCGAAGT GGAAAAACTA
CGCTCGTCTT CCTCTACCGG TTTATCCGTT ATTCACGTAG AAATATACGA CCGTTACTTT
AACTTAGATG CAATATGGCA AGACGTGCGC AACAAGGTGG CGCAAGCACA AGCCTCACTT
CCAGAAGGAA CCAGCGCTCC TTATGTGAAT GATGAGTTTG GCGATGTATC AGTACTGACA
TTGGCACTCA CCGCAGATGG TTTTGACTTA AGTAAGATGT TCGACATTTC AAAGCACACC
CGGGATACCT TGTATGCGGT AAAAGGTACG AAAAAAATTG AATTACTAGG GGTACAAGAT
GAGCGCATTT ATTTAGAAAC GTCTAACGCG AAACTCTCTC AGCTAGGCAT TTCTCCCAAT
GCATTAATGA GCGCACTTCA AACCCAGAAT ATCATTAGTT CGGGCGGACA AATCGACACG
GGCTTATTGT CTTTTATCAT TGAGCCTACG GGCAACTTTA GCAGTCTAGA AGACTTAGCA
GAAACGTACA TAACCATTCC AGGGACCCAA GAGTCAATTG CGCTTAGCGA TATTGCCACA
CTTAATCGAG GCTATGTTGA CCCGCCAGAT GACTTAGCCT ACTTCAATGG CGAGCAAGCC
ATTGTTTTCG CCATTTCTAT GTTGCCTGAA TACAATATAT TGGAGTATGC CCCTCGCCTC
AAAGCCGCCA TTGAACAACT TGAAAGTTCT CTGCCTGTTG GATATCAACT GCATATCGCC
ACGTACCAAG CCGAGCAAGT GGAAAAAACC GTTCAAGGTG TGTCTATGAA CGTACTACAA
ACGCTCATTA TCGTGTTGAT TGTGGTGGTG CTCTTCTTAG GCATGCGCAC TGGTCTAATC
GTTGGCACGA TAGTGCCATT TGTCATGCTC TCGACTTTAA CTATTATGCA AGTTTTTGAC
ATTCGTTTAG AGCGCATGAG TCTGGCCACG CTCATCATCG CCTTAGGTTT GCTGGTGGAT
AATGGCATCG TTATCGCTGA GGATTTTAAG CGACGTTTAG AAGATGGCGA AGAGCGTTTC
AAGGCCATGA CCCAAGGCGG TAAAGAACTT GCGGTACCTT TACTCAGTTC ATCCGCCACG
ACTATTTTGT TTTTCTTACC CCTGATGCTC GCTGAGCACG TTGCCGGAGA GTACACGCGT
TCGGTATCCT TGGTTATCTT GATCACTTTA TTGACCAGCT GGGTGCTGGC GCTATGCGTT
ACACCACTGT TGTGTTATCA CTTTATCAAA GTGGATGAGC CTCAGGGTGG CGCTGATGCA
CTGGCTTCAA AGAAAGTTAC AGAGCGTTAC GAATCGTTCT TGCACGTGAT CCTGCGCTAT
AAATTGCTTT TTATGGGCAC GCTATTCGCA CTATTAATCG CGTCGGTATT CGCCATGAAA
GTGATACCAA AACAGTTTTT TCCAGAATCT GATCGTAATC AATTGATCGT TAACATCGAT
TTACCCAGCG GCACATCTGA GCGACAAACT AACACCCAAA TACGCAATAT CATGGATTGG
CTTGATAATG ATTCAGGTTA TGACTTTATT GAAAGCCATT CTGCTTATGT TGGTTTCAGC
GGGCCACGAT TTGTATTGTC TCTAAGTCCT GAGGATCCCG CCGAGAATAA AGCCTTTATG
GTGCTTAATA TCAAACCAGA GAACGACATC GCCGCGTTAG CTATTAAGCT TGATGAAGAT
CTCGAAAAGC ATTTCGTCAA CATCTCTGTG CGGGCTAAAA AGATGTTCTT GGGCCCGTCT
GACTCAAAAA CGATTAAAAT CCAAGTTAAA GGCCCAGACA AAGACGTCAT TTATCAAAAA
GCCCAAGAGG TCATGGACCT GCTCTATGAT GTGCCAGATA CCCGGGACAT CCGCAATGAC
TGGGAAAGTA TGATTGCTAA AATTGAAGTG CGGGTTGACC AGCAACGTGC TCGCCGCGCA
TCAGTTACCT CACAAGACAT CGCTAATTCT TTGCAAGCGT ATTTCTCTGG TGCATCGGTC
ACAGAGTTTC GAGAAGAAGA TGACATCATC CCTATCATGT TCAGGGCCAG TGATGCTGAG
AGGCACAACC TAGACCGTTT ACGCTCATTG AATGTGTTCT CTCAAGCCAC GGGCAAGGCT
ATCCCGCTGT TTCAGGTAGC TGAGTTTTCA CCGGTAAACC AATACTCGAT TATTCAGCGC
GAAGACATGT TTACCACTGT CAGTGTTGAG GCCAGAAATA GCCGTATGGC TGCAGAAGAT
TTAAAAGCAA TAATCGATGC AGATATTCAA AAATTGGCCG CTGAGCTGCC GCTAAATCAT
CACATCGAAT ACGACGGTGT GATCGTGCAA TCACAAGAAG CACAACAGGC GCTTAGCGCA
AGCATGCCAA TGGTATTAGG CTTGATTCTG ATTTTGTTAG TGGCGCAATT TAACTCATTT
AGGCGTGCAG GCATCATTGT ATTAACCATG CCTCTGTCCT TTATCGGAGC GGTACTGGGC
TTAAGCGTTA TGTTTGCACC GTTTGGTTTT ATGGTGACCT TGGGCTTGTA CAGCTTAGCG
GGGATTATCA TCAATAATGC AATTGTGTTG ATTGATAGAA TTGATATTGA GCGACGTGAC
GGTGCGTCTG ATTACGATGC CATAGTGAAC GCCTGTATTA CTCGGGTCCG GCCTATTGCG
ATGACCACCA TTACTACCGT GGCGGGCCTA CTGCCATTGA TACTCAGCCA CGACCCACTT
TTTTATGGCA TGGCGTGTGT GATTGCTTTT GGTCTCGCTG TGGGCACGGT GCTGACGTTA
GGCGCGGTAC CTGTGTTGTA CGCTGGATTT TTCAGGGTCT CCCAGGAAGA GTCGGCCAAC
GCCGTTTAA
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| Protein sequence | MNLTEFSFKH QKLVLMIVAI LLINGVISYF TLPAREDPSI TIREAIVSTA YPGMSPDRVE
LLITKTLEEE IRKIPEVEKL RSSSSTGLSV IHVEIYDRYF NLDAIWQDVR NKVAQAQASL
PEGTSAPYVN DEFGDVSVLT LALTADGFDL SKMFDISKHT RDTLYAVKGT KKIELLGVQD
ERIYLETSNA KLSQLGISPN ALMSALQTQN IISSGGQIDT GLLSFIIEPT GNFSSLEDLA
ETYITIPGTQ ESIALSDIAT LNRGYVDPPD DLAYFNGEQA IVFAISMLPE YNILEYAPRL
KAAIEQLESS LPVGYQLHIA TYQAEQVEKT VQGVSMNVLQ TLIIVLIVVV LFLGMRTGLI
VGTIVPFVML STLTIMQVFD IRLERMSLAT LIIALGLLVD NGIVIAEDFK RRLEDGEERF
KAMTQGGKEL AVPLLSSSAT TILFFLPLML AEHVAGEYTR SVSLVILITL LTSWVLALCV
TPLLCYHFIK VDEPQGGADA LASKKVTERY ESFLHVILRY KLLFMGTLFA LLIASVFAMK
VIPKQFFPES DRNQLIVNID LPSGTSERQT NTQIRNIMDW LDNDSGYDFI ESHSAYVGFS
GPRFVLSLSP EDPAENKAFM VLNIKPENDI AALAIKLDED LEKHFVNISV RAKKMFLGPS
DSKTIKIQVK GPDKDVIYQK AQEVMDLLYD VPDTRDIRND WESMIAKIEV RVDQQRARRA
SVTSQDIANS LQAYFSGASV TEFREEDDII PIMFRASDAE RHNLDRLRSL NVFSQATGKA
IPLFQVAEFS PVNQYSIIQR EDMFTTVSVE ARNSRMAAED LKAIIDADIQ KLAAELPLNH
HIEYDGVIVQ SQEAQQALSA SMPMVLGLIL ILLVAQFNSF RRAGIIVLTM PLSFIGAVLG
LSVMFAPFGF MVTLGLYSLA GIIINNAIVL IDRIDIERRD GASDYDAIVN ACITRVRPIA
MTTITTVAGL LPLILSHDPL FYGMACVIAF GLAVGTVLTL GAVPVLYAGF FRVSQEESAN
AV
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