| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2233 |
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| Symbol | |
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| ID | 4172385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2705709 |
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| End bp | 2706305 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055241 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_661805 |
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| Protein GI | 109898550 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.237391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAATA ATATTGATAC TGATAGCAAA AACCAAGGCA CCGCTGATGG TCAAACTGCA
GACGGCAGCG AAGTTAAAAA GGACAGCGTC GCCCTGTGCA TCATTAATCC TAAAAGCCCA
CAAAACATGG GCAGTATTCT GCGTGCAGCC GGATGTTATG GCGCTGATAC CATCTACTAC
ACAGGGGAAC GCTATGCGCG CGCTCGAGCG TTCAATACCG ATACTAAAAA TGTCGGTTTA
AACATTCCAG TTGAACAGGT CACCACACCT GAGCCGGCGC CCGGCATAGC CATGGTGGCT
GTCGAATTAG TAGAGGGCGC TACGCCCTTA CCTCACTTTA GGCACCCTAA ACATGCATAC
TATGTATTTG GTCCAGAAGA TGGCTCTATT GAACAAAGCG TTTTAGATAG ATGCCAACAT
GTGGTGTATG TACCGACTAA AGGCTGCATG AACTTAGCAG CGACGGTGAA CGTATTACTT
TATGACCGTC TCGCCAAATC GAACAACACC CAATACGGTG ACCAAGTGAT TGTTGCGAGT
CGAGACACCA ATAATAGGAC CAGTGTGCTA AATAAAGCAC AATCACAGGA TCAGTAA
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| Protein sequence | MQNNIDTDSK NQGTADGQTA DGSEVKKDSV ALCIINPKSP QNMGSILRAA GCYGADTIYY
TGERYARARA FNTDTKNVGL NIPVEQVTTP EPAPGIAMVA VELVEGATPL PHFRHPKHAY
YVFGPEDGSI EQSVLDRCQH VVYVPTKGCM NLAATVNVLL YDRLAKSNNT QYGDQVIVAS
RDTNNRTSVL NKAQSQDQ
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