| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2226 |
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| Symbol | |
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| ID | 4172378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2693219 |
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| End bp | 2694946 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055234 |
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| Product | purine nucleoside permease |
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| Protein accession | YP_661798 |
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| Protein GI | 109898543 |
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| COG category | [F] Nucleotide transport and metabolism
[S] Function unknown |
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| COG ID | [COG3542] Uncharacterized conserved protein
[COG5042] Purine nucleoside permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.822205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAAA CGTTTTCCAA ATCTGCGCTT TGTCTCACCA GTATCCTTTT TTTAAACCTT
GCGTTAACTG CGTGTCAAAG CACGACGCCA TCATCAACTT CATCGCCATC AAGCGCTGCA
AACACGTCGC AAGCCGCCAC TGAAATGACC CAACCTCTAG AAATTAAAGT CGTAGTGGTC
ACCATGTTTG AAATTGGCGA AGACGATGAC GACAAGCCCG GCGAATTCCA AATGTGGAAA
GAAGGCCAAA ATCTAGATAC CCGCTATGCA TTTCCTATGT CACATCACGA TATTTACGTG
AATGAAGACA CAGGCGTTAT GGGCATAGTC ACGGGTATGG GCACAGCAAA GGCAGCTGCG
GCTATCATGG CCTTAGGGTT AGATCCACGC TTTGATTTAA CGCACGCCTA TTGGTTAGTC
GCTGGCATAG CCGGGGTTGA CCCGCAAGAT GCCTCAATCG GCTCAGCTGT GTGGGCCAAC
TGGTTAGTTG ATGGCGACCT AGCGCATGAA ATTGACGCCA GAGAAATTCC GGCAGATTGG
AAAAGCGGTT ACTTTCCCTT ATTTAGCGTA GAGCCTATCA GCGCAGACCC CGTCACGCCG
AGTGATGAAA AGGTGCAAGC CATGAATGGT GAGGCATATC AGCTTAACAC TCAGCTAACT
AAGTGGGCCT ATGAGTTAAG TAAAGATACT GCACTAAGCG ACTATCCTGC GATGTACGAA
TTACGTGAAA AATACCTCAA TTACCCCAAT GCCCGTAAGC GTCCGTTTGT ATTAATTGGC
GACCACATGG CGGCAGCTAC TTTCTGGCAT GGAAACTTAC TAAATGAATG GGCCAATGAT
TGGTCAGCCT ATTGGAGTAA CGGCCAAGCT AACTTTGTGA CCTCAGGCAT GGAAGACACC
GGCAGTTATC AATCGATGAT CTATTTGGAT AACGCGCAAA AAGCTGACAA GTCGCGTTTT
ATGGTATTGC GCGCTGCTAG CAACTATTCA ATGCAGCCCG ACAGTCTAAC CGCCGCAAAC
AACCTTGCCA TGGAAAGCGG AGAAAATGGC TATGCTGGAA TGCAATCAGC CCTTGAATCT
GCCTACAGTG TCGGCAGTGT AGTGGTGAAT GATATCATCG CTAATTGGGA TATTTACAAA
GATGCCCTGC CCTATGAGGC ATCAAAAGTG GCCCCAGATG AAGATACGTT AAACGAGATG
TTAACCCCGA CCACTGAGCC GGTGGATGCC AAACTCAGCG CAGAAGAGCT AATAAAATCG
CTTAATCTAA CGGGTCATGT GGAAGGCGGC TTTTATCGTC AAACGTTTAA AGCGGATCAC
CGCCCCATGT TAAGCACAGA GCATGGGGAG CGCGTCAATA TGACATCTAT CTACTATTTG
CTCAGTGCGA AATCGCCCAT CGGTCACTTT CACATGAACC GCTCGGATAT TATGCATTAC
TTCCACGTGG GTGACCCCAT TACCTATTAT TTGCTCAATC AAGACGGCAG CCTTGAAACT
CATATACTCG GCCCTGATCC AACCCAAGGT CATGAGATGC AAATGGTGGT AAAAGGCGGT
ACATGGAAAG CATCAAAAAT ATCCACGACC GGTGATTATG GTTATGGGCT TATTGGCGAA
GCCGTCGCGC CGGGTTTTGA ATATCAAGAC ATGCAGTTAG CTGAACAAGC AGAACTTGTC
AGCACCTTCC CACAACACAG CGATTTGATT AAAACCCTAA CGCGCTAA
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| Protein sequence | MLKTFSKSAL CLTSILFLNL ALTACQSTTP SSTSSPSSAA NTSQAATEMT QPLEIKVVVV
TMFEIGEDDD DKPGEFQMWK EGQNLDTRYA FPMSHHDIYV NEDTGVMGIV TGMGTAKAAA
AIMALGLDPR FDLTHAYWLV AGIAGVDPQD ASIGSAVWAN WLVDGDLAHE IDAREIPADW
KSGYFPLFSV EPISADPVTP SDEKVQAMNG EAYQLNTQLT KWAYELSKDT ALSDYPAMYE
LREKYLNYPN ARKRPFVLIG DHMAAATFWH GNLLNEWAND WSAYWSNGQA NFVTSGMEDT
GSYQSMIYLD NAQKADKSRF MVLRAASNYS MQPDSLTAAN NLAMESGENG YAGMQSALES
AYSVGSVVVN DIIANWDIYK DALPYEASKV APDEDTLNEM LTPTTEPVDA KLSAEELIKS
LNLTGHVEGG FYRQTFKADH RPMLSTEHGE RVNMTSIYYL LSAKSPIGHF HMNRSDIMHY
FHVGDPITYY LLNQDGSLET HILGPDPTQG HEMQMVVKGG TWKASKISTT GDYGYGLIGE
AVAPGFEYQD MQLAEQAELV STFPQHSDLI KTLTR
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