Gene Patl_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2223 
Symbol 
ID4172375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2687391 
End bp2688851 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content46% 
IMG OID638055231 
Producturacil-xanthine permease 
Protein accessionYP_661795 
Protein GI109898540 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.9529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACTA CTCGCCCCAA AAACGGTGAA ATATTATATT CTTTAACAGA TGTCCCTTCT 
GTTGGTCATA GCACCACTGC TGCGCTTCAG CATATTATGG CGTGCTTTAT TGGCATCATT
ACCCCCACAT TGATCATCGG CTCTGTGCTT GGCTTACAGG CTGAAATACC CTATCTGATC
AGTATGGCGC TGATGACATC CGGCGTATCC ACCTTTATTC AAGCTAAAAA ATTTGGGCCT
GTCGGCTGCG GGCTTATCGC TGTGCAGGGA ACGAGTTTTA CTTTCATCAG CGCGCTGTTA
GTCGCCGGAA CCGCAATAAA AAGTCGTGGT GGGTCGAATG AAGAAATCAT GGCTCTGATG
TTTGGTTTAT GTTTCTTTGG TGCCTTTGTT GAAATTGTAT TAAGTCAATT TATTCAGTAT
TTAAAAGCAG TGATCACCCC GCTCACTACA GGGATCGTGA TCACCACTAT CGGTATCACC
TTAATTAAAG TTGGCATGAC CGATTTATCC GGCGGGTTCA ATGCAACGGA TTTTGGCGCG
CCGCATAATC TCATCTTAGG CCTGAGCGTA CTTATTACCG TGATTGCCCT TAATGCATCT
AAATATCCAC TGTTGCGCTT AAGCGCTATA TTCATTGGCA TGTTAGTAGG CTGTATCATT
GCTTGGTATC AGGGGATCCT GTCATTTAAT AATATGCTGT CATCCCCTTT AATCAGCATA
CCTGAGCCGT TTAAATACGG TGTCGCCTTT GACTGGGAAT TGTTTATTCC GATCGCACTG
GTGTACTTCC TAAGTGCAAT TGAAACCTCA GGAGACTTAA CCGCCAACAG CCTTTTTTGT
AAGGAGCCAA TTAAAGGGCC GATTTACCTC AAACGCATAA AAGGGGGAAT TTTAGCGGAC
GGGGTTAATT CTATGTTGGC AGCCATGTTT AATAGCTTTC CCAATACCAC ATTCGGGCAA
AACAATGCGG TAATACAAAT GACCGGTGTC GCCAGTCGCC ATGTTGGATT TTACATCGCC
GGCTTTCTGG TGTTACTTGG CTTATTTCCA GTTGTTGGCA GTGTCTTGCA GCTTATGCCT
AAACCTGTGC TTGGCGGCGC AACGCTTGTT ATGTTTGCCA CTATTGCGGT TGCGGGCGTA
AAAATACTGA CCAGCGAGCC TATAGATAGA CGAAAAAGCC TTATTATCGC AACGTCTCTA
GGATTAGGTT TAGGTGTCAT GATGGTACCT GAGACACTTG CCCAATTACC GCAATTAGCC
AACAACATAC TTTCATCTTC GGTGACCACT GCCGGTTTCT GCGCGATTAT CATGAGCATT
GCTATACCCG AGCCAAAAGC TGGTGAGCTG GAAGAAGATA ATGTTGAGTC ACAAGACCCG
TCACTAGCGC CTCGATTCAA TCACCCAGCA GCCACAGTGT TAGCTGATGA ATCGCCAATC
AACGAGTCTG AACGGCAATG A
 
Protein sequence
MQTTRPKNGE ILYSLTDVPS VGHSTTAALQ HIMACFIGII TPTLIIGSVL GLQAEIPYLI 
SMALMTSGVS TFIQAKKFGP VGCGLIAVQG TSFTFISALL VAGTAIKSRG GSNEEIMALM
FGLCFFGAFV EIVLSQFIQY LKAVITPLTT GIVITTIGIT LIKVGMTDLS GGFNATDFGA
PHNLILGLSV LITVIALNAS KYPLLRLSAI FIGMLVGCII AWYQGILSFN NMLSSPLISI
PEPFKYGVAF DWELFIPIAL VYFLSAIETS GDLTANSLFC KEPIKGPIYL KRIKGGILAD
GVNSMLAAMF NSFPNTTFGQ NNAVIQMTGV ASRHVGFYIA GFLVLLGLFP VVGSVLQLMP
KPVLGGATLV MFATIAVAGV KILTSEPIDR RKSLIIATSL GLGLGVMMVP ETLAQLPQLA
NNILSSSVTT AGFCAIIMSI AIPEPKAGEL EEDNVESQDP SLAPRFNHPA ATVLADESPI
NESERQ