Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2223 |
Symbol | |
ID | 4172375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2687391 |
End bp | 2688851 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638055231 |
Product | uracil-xanthine permease |
Protein accession | YP_661795 |
Protein GI | 109898540 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease [TIGR03173] xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.9529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACTA CTCGCCCCAA AAACGGTGAA ATATTATATT CTTTAACAGA TGTCCCTTCT GTTGGTCATA GCACCACTGC TGCGCTTCAG CATATTATGG CGTGCTTTAT TGGCATCATT ACCCCCACAT TGATCATCGG CTCTGTGCTT GGCTTACAGG CTGAAATACC CTATCTGATC AGTATGGCGC TGATGACATC CGGCGTATCC ACCTTTATTC AAGCTAAAAA ATTTGGGCCT GTCGGCTGCG GGCTTATCGC TGTGCAGGGA ACGAGTTTTA CTTTCATCAG CGCGCTGTTA GTCGCCGGAA CCGCAATAAA AAGTCGTGGT GGGTCGAATG AAGAAATCAT GGCTCTGATG TTTGGTTTAT GTTTCTTTGG TGCCTTTGTT GAAATTGTAT TAAGTCAATT TATTCAGTAT TTAAAAGCAG TGATCACCCC GCTCACTACA GGGATCGTGA TCACCACTAT CGGTATCACC TTAATTAAAG TTGGCATGAC CGATTTATCC GGCGGGTTCA ATGCAACGGA TTTTGGCGCG CCGCATAATC TCATCTTAGG CCTGAGCGTA CTTATTACCG TGATTGCCCT TAATGCATCT AAATATCCAC TGTTGCGCTT AAGCGCTATA TTCATTGGCA TGTTAGTAGG CTGTATCATT GCTTGGTATC AGGGGATCCT GTCATTTAAT AATATGCTGT CATCCCCTTT AATCAGCATA CCTGAGCCGT TTAAATACGG TGTCGCCTTT GACTGGGAAT TGTTTATTCC GATCGCACTG GTGTACTTCC TAAGTGCAAT TGAAACCTCA GGAGACTTAA CCGCCAACAG CCTTTTTTGT AAGGAGCCAA TTAAAGGGCC GATTTACCTC AAACGCATAA AAGGGGGAAT TTTAGCGGAC GGGGTTAATT CTATGTTGGC AGCCATGTTT AATAGCTTTC CCAATACCAC ATTCGGGCAA AACAATGCGG TAATACAAAT GACCGGTGTC GCCAGTCGCC ATGTTGGATT TTACATCGCC GGCTTTCTGG TGTTACTTGG CTTATTTCCA GTTGTTGGCA GTGTCTTGCA GCTTATGCCT AAACCTGTGC TTGGCGGCGC AACGCTTGTT ATGTTTGCCA CTATTGCGGT TGCGGGCGTA AAAATACTGA CCAGCGAGCC TATAGATAGA CGAAAAAGCC TTATTATCGC AACGTCTCTA GGATTAGGTT TAGGTGTCAT GATGGTACCT GAGACACTTG CCCAATTACC GCAATTAGCC AACAACATAC TTTCATCTTC GGTGACCACT GCCGGTTTCT GCGCGATTAT CATGAGCATT GCTATACCCG AGCCAAAAGC TGGTGAGCTG GAAGAAGATA ATGTTGAGTC ACAAGACCCG TCACTAGCGC CTCGATTCAA TCACCCAGCA GCCACAGTGT TAGCTGATGA ATCGCCAATC AACGAGTCTG AACGGCAATG A
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Protein sequence | MQTTRPKNGE ILYSLTDVPS VGHSTTAALQ HIMACFIGII TPTLIIGSVL GLQAEIPYLI SMALMTSGVS TFIQAKKFGP VGCGLIAVQG TSFTFISALL VAGTAIKSRG GSNEEIMALM FGLCFFGAFV EIVLSQFIQY LKAVITPLTT GIVITTIGIT LIKVGMTDLS GGFNATDFGA PHNLILGLSV LITVIALNAS KYPLLRLSAI FIGMLVGCII AWYQGILSFN NMLSSPLISI PEPFKYGVAF DWELFIPIAL VYFLSAIETS GDLTANSLFC KEPIKGPIYL KRIKGGILAD GVNSMLAAMF NSFPNTTFGQ NNAVIQMTGV ASRHVGFYIA GFLVLLGLFP VVGSVLQLMP KPVLGGATLV MFATIAVAGV KILTSEPIDR RKSLIIATSL GLGLGVMMVP ETLAQLPQLA NNILSSSVTT AGFCAIIMSI AIPEPKAGEL EEDNVESQDP SLAPRFNHPA ATVLADESPI NESERQ
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