Gene Patl_2219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2219 
Symbol 
ID4172371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp2682815 
End bp2683504 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content43% 
IMG OID638055227 
Productcytochrome B561 
Protein accessionYP_661791 
Protein GI109898536 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.916384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACATC ACAAAACATT GGTCTGGGAT CTCCCCTTAC GCATTTTTCA TTGGGCCCTC 
GTACTGCTGA TTTTTGCGCA GTGGCTAACG GCTGAAGTAT TAGATGGCTA CATGGATCTG 
CATGCTAAAT TTGGTTACGG TTTATTAGGC TTGGTAATAT TTCGAATAAT TTGGGGATTT 
GCTGGGCCAA AACATGCCCG GTTTAGTTCT TTTTTACGTG GCCCTAGCGC CATTTTACAC 
TACACAAGTA CACTTTTTAG CCGCCATCCA TCAACGTACA CGGGGCATAA TCCACTCGGC 
GCCCTAATGG TGCCCGCTAT TTTGATTGTG GTCGGCGCTC AGGCATTAAG CGGTCTGTTC 
GTTACCGATG ATGTGTTATT TACAGGGCCT TATTACTCAA GCGTATCTGA TGAGACGCAG 
GGTATCATGC AGTGGCTGCA TCACACCCTG TTCGATGTAT TATTGGTGAT TATTGGTTTA 
CACATTAGTG CTATTTTAAG TTACGAGTTA TTGCTTAAGA AGCCCTTGAT CGGTGCGATG 
CTTCATGGGC ATAAAAATGT GCAATCGAAA AGCGGGATTA ATCATTCAAG ACTGATATTA 
GCTTTAGTAC TGGCGATGGT TATTTGTGCC TTCATATATT GGTTGGTCGT TATTGCTCCG 
CCCGAAGTAG AACTTGATTA TTACTATTGA
 
Protein sequence
MTHHKTLVWD LPLRIFHWAL VLLIFAQWLT AEVLDGYMDL HAKFGYGLLG LVIFRIIWGF 
AGPKHARFSS FLRGPSAILH YTSTLFSRHP STYTGHNPLG ALMVPAILIV VGAQALSGLF 
VTDDVLFTGP YYSSVSDETQ GIMQWLHHTL FDVLLVIIGL HISAILSYEL LLKKPLIGAM 
LHGHKNVQSK SGINHSRLIL ALVLAMVICA FIYWLVVIAP PEVELDYYY