| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2216 |
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| Symbol | |
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| ID | 4172368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2677047 |
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| End bp | 2677850 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638055224 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | YP_661788 |
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| Protein GI | 109898533 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0282245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAA TTGCAATATT TGGGGCCAAC GGCCGAATGG GTCGCGTATT AATTGAAGCG
ATAGATCAAT CGCAAAATGC CACATTAAAC GCGGCATTTG TCAGAGCAAG CTCCTCTATG
ATGGGTGTTG ATGTTGGGGA ACTAGCGGGC ATAGGCCAGC GTGGACTCAC TGTCACTGAC
GCCAATTCCG CTGACTTTTC GCAAATTGAC ATTGTCATCG ATTTCACCCT CCCAGAAGCG
CTCGAAGCTA ATTTAGCCCT GTGTGTCCAA CAAAAAAAGC CAGTCGTCAT CGGTACGACA
GGTTTAAACC AACAGCAAAA AGACGCTCTG CAACGGGCGA GCCAGCATAT TCCTATCGTT
TTTGCTGCTA ATTACAGTAT CGGGGTCAAC CTATTACTTA ACTTAGCCCG CCAAACTGCG
CGTGTTATGG GGGGGACGGC AGACATCGAG ATTATAGAAG GCCATCACAG GTTTAAAAAA
GATGCGCCGT CTGGTACTGC CGTGGCAATA GGTGAAGTTA TCGCTGATGA GCTTGGCCGT
GACCTATCTA CCTGTGCTGT ATATGGCCGT GAAGGCGACA CGGGCGAGCG TGACCAACAA
ACGATTGGCT TCGCTACCGT CAGGGCAGGG GATATAGTGG GTGAACACAC CGCACTGTTT
GCAGATATTG GTGAGCGAAT CGAATTAACC CATAAAGCCT CAAGCCGCCT GACCTTTGCT
AATGGTGCTG TTAAAGCCGC TGTTTGGCTT AAGAATAAAT CCCCAGGGCT CTATGATATG
CAAGATGTAT TGGGGCTAGC CTAA
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| Protein sequence | MNKIAIFGAN GRMGRVLIEA IDQSQNATLN AAFVRASSSM MGVDVGELAG IGQRGLTVTD
ANSADFSQID IVIDFTLPEA LEANLALCVQ QKKPVVIGTT GLNQQQKDAL QRASQHIPIV
FAANYSIGVN LLLNLARQTA RVMGGTADIE IIEGHHRFKK DAPSGTAVAI GEVIADELGR
DLSTCAVYGR EGDTGERDQQ TIGFATVRAG DIVGEHTALF ADIGERIELT HKASSRLTFA
NGAVKAAVWL KNKSPGLYDM QDVLGLA
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