Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2206 |
Symbol | |
ID | 4172358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2664143 |
End bp | 2665576 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055214 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_661778 |
Protein GI | 109898523 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0163044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA AACTTTTTAT TAAAACTTGG GGCTGTCAGA TGAACGAGTA TGACTCGCAG AAGATGGCTG ACTTATTGGA TTCAACCCAT GGATATCAAG TTGCTGACAC CGCGGAAGAA GCCGACATCA TTTTACTCAA TACGTGTTCT ATCCGCGAAA AAGCCCAAGA GAAAGTGTTT CATCAATTGG GACGCTGGAA AAACCTCAAA CAAGATAAGC CTGAATTGAT CATTGGTGTT GGTGGCTGCG TGGCATCGCA AGAAGGTCAG GTGATTCGTC AACGTGCGCC ATTTGTAGAT TTAGTGTTTG GTCCGCAAAC GCTGCACCGT TTGCCAGAAA TGATAAATCA GATCAAAGGT GGTAGCTCCT CCGTTATTGA TATTAGCTTC CCTGAGATAG AAAAGTTTGA CCGCTTGCCA GAACCCAAAG CGGAAGGCCC GACGGCCTTT GTTTCTATTA TGGAAGGTTG CTCAAAATAT TGTACTTTCT GCGTGGTACC TTATACCCGG GGCGAAGAAG TCAGTCGTCC AGTCGATGAT GTATTACTTG AAGTCGCACA GCTAGCAGAA CAAGGTGTAC GTGAAGTCAA TTTGTTAGGT CAAAACGTGA ATGCGTTTCG TGGCCCACAT CATGATGGCG CGATTTGTAC CTTTGCTGAG TTACTAGAAA TGGTTGCCTC AATCGATGGT ATTGACCGTA TTCGTTACAC CACATCACAT CCCGTTGAGT TCACTGACGA TATCATTGAT GCTTACGCGA CCATTCCTGA ATTAGTTGAT CATTTACACC TGCCTGTACA GTCAGGCTCA GATCGTGTCT TGAATTTAAT GAAGCGAGGC CATACTGCAA TAGAGTACAA GTCGAAAATT CGTAAGCTTA GGAAGATTCG TCCTAACTTA AGTATGTCAT CAGACTTTAT CATCGGCTTT CCAGGTGAAA CTGACGATGA TTTTGAAGCG ACAATGGATT TGATTCAAGC AATGGATTTC GATTTGAGCT TTAGCTTTAT TTACAGTGCG CGTCCGGGTA CGCCGGCAGC AGATTTACCC GACGATGTAT CTGAAACAAC GAAAAAAGAG CGTTTACAGC TATTGCAAAA TCGCATCACC CAGCAAGCGT TGCGCATTGC TCGGAATATG ATTGACAGTG AACAACGAGT ATTAGTAGAA GGCCCATCTA AAAAGAATCC GATGGAGCTT TCTGGGCGTA CTGAAAACAA CCGAGTGGTT AACTTTGAAG GCACTCCGGA TATGATTGGC GGCTTTGTAG ATGTAAAAAT CACAGATGTG TTTGCCAACT CATTGCGCGG AGATGTTCTA CGCAAAGAAG CCGACATGAA TTTACGTATC AATGTGGCGC CTCAGGCCAT ATTGGCCAAG CAAACAAATA AAACCGATGC CTTAGGCGTC GCTCAGTTTG TGCCAGCACA TTGA
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Protein sequence | MTKKLFIKTW GCQMNEYDSQ KMADLLDSTH GYQVADTAEE ADIILLNTCS IREKAQEKVF HQLGRWKNLK QDKPELIIGV GGCVASQEGQ VIRQRAPFVD LVFGPQTLHR LPEMINQIKG GSSSVIDISF PEIEKFDRLP EPKAEGPTAF VSIMEGCSKY CTFCVVPYTR GEEVSRPVDD VLLEVAQLAE QGVREVNLLG QNVNAFRGPH HDGAICTFAE LLEMVASIDG IDRIRYTTSH PVEFTDDIID AYATIPELVD HLHLPVQSGS DRVLNLMKRG HTAIEYKSKI RKLRKIRPNL SMSSDFIIGF PGETDDDFEA TMDLIQAMDF DLSFSFIYSA RPGTPAADLP DDVSETTKKE RLQLLQNRIT QQALRIARNM IDSEQRVLVE GPSKKNPMEL SGRTENNRVV NFEGTPDMIG GFVDVKITDV FANSLRGDVL RKEADMNLRI NVAPQAILAK QTNKTDALGV AQFVPAH
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