| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2203 |
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| Symbol | |
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| ID | 4172355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2661302 |
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| End bp | 2662213 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055211 |
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| Product | DNA-binding transcriptional activator GcvA |
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| Protein accession | YP_661775 |
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| Protein GI | 109898520 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0223993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCGCA GACTGCCCCC ACTTAACGCT CTTAAAGCCT TCGAAGCCGC AGCGCGTCAT
TTGAGCTTTA CCCGCGCTGC TGAAGAACTC TTTGTGACAC AAGCGGCTGT CAGTCATCAG
ATTAAATCCC TCGAAGAATT TCTATCCATG AAACTCTTTA TGCGTAAAAA CCGCTCTTTG
TTACTCACTG AGGAAGGTCA AAGTTATTAC TTAGATCTCA AAGATATTTT TCAAGCGTTA
CAAGAAGCGA CTCAGCGGCT ACTCGCCCGA GGAGAAAAGG GCGCGATCAC GGTCGCTCTG
CCGCCAAGTT TCGCCATTCA GTGGCTCGTT CCGCGTCTGA ATCAGTTTAG CCAGTCTAAC
CCTGATATCG ATATTAGGAT CAAAGCGGTG GATTTTGACG AGGGTTTTTT AACAGATGAT
GTGGATGTGG CCATTTACTA TGGTCGTGGC AAATGGCCAA ATGTATATGC TCAGAAACTG
CACACTGAAT ATTTAACGCC AGTATGTTCA CCGCTGTTGT TCCAAGGTCA AAAGCCGCTT
GAAAAATTAG AAGATTTGAA ACATCACCTA TTGCTACACG ATTCATCAAG AGAAGCGTGG
AAAAACTGGA TCAAGCACTT TCGCATCCCA GGTATCAACG TAAACCAAGG GGCCATATTC
AGTCACTCCA TGTTAGTACT GCAAGCCGCC GCATTGGGGC AAGGTATTGC ACTAGGGCAC
AGCGTTTTAG CGCGGCCTGA AATTGAATCA GGTCGATTAG TGTGTCCTTT TGATGAGAGA
CTCATCGCCA CCAATGCGTA CTATGCAGTA TGTCACCAGT CTCAAGCTGA ACTTGGCAAG
ATAGTCGCAT TCTTACAGTG GCTGCAAAGC CAAGTAGAAG ACGAACAGGA AGATGATGAT
TTTAACCAAT AA
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| Protein sequence | MNRRLPPLNA LKAFEAAARH LSFTRAAEEL FVTQAAVSHQ IKSLEEFLSM KLFMRKNRSL
LLTEEGQSYY LDLKDIFQAL QEATQRLLAR GEKGAITVAL PPSFAIQWLV PRLNQFSQSN
PDIDIRIKAV DFDEGFLTDD VDVAIYYGRG KWPNVYAQKL HTEYLTPVCS PLLFQGQKPL
EKLEDLKHHL LLHDSSREAW KNWIKHFRIP GINVNQGAIF SHSMLVLQAA ALGQGIALGH
SVLARPEIES GRLVCPFDER LIATNAYYAV CHQSQAELGK IVAFLQWLQS QVEDEQEDDD
FNQ
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