Gene Patl_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2202 
Symbol 
ID4172354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp2660695 
End bp2661318 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content47% 
IMG OID638055210 
Producthypothetical protein 
Protein accessionYP_661774 
Protein GI109898519 
COG category[R] General function prediction only 
COG ID[COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.101227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTAA CCAATAAAGC ACAGGATCCG ATTGCTCATT TAATACTTGC TCATGGTGCA 
GGGGCAGGTA TGCACAGTGC GTTTATGGCG CGAGTTGCTG AATTGTTCGC CCAGCGAGGC 
GTCACGGTAA CTCGATTCGA TTTCGAGTAT ATGCAAAAAG CTGGTGAGTT AAACCGCAGG 
CAGCCGCCAG ATAGAATGCC TAAGCTTCAG GCATACTTTA GCTATATTAT CGCCGAGTTA 
GACGCTAGCT TACCGCTTTT TATTGGCGGC AAGTCAATGG GAGGACGAGT GGCGACCATG 
TTGTTGGATG AATCAGATGC CATGGGAGGG ATATGTTTTG GTTACCCATT TCATCCGCCA 
GGTAAATTGG ACAAACTAAG AACAGAGCAC TTAGCCATAT TAAACAAGCC ACTCTTGGTG 
GTACAGGGAA GTCGCGATAC ATTTGGCACC CAAGAAGAAA TGGCAACATA TGATTTACCT 
AGCACCATTC AAACGTATTT TTTGCCTGAT GGCGATCACA GCTTGAAACC ACGCAAGCGC 
TCAGGTTATA CCGAAGAGGC GCACATTATT GCTGGCGTCG ACGCAGGTGT TGAATTTATT 
CGCCAGCTTG TAACCAGTGA ATGA
 
Protein sequence
MILTNKAQDP IAHLILAHGA GAGMHSAFMA RVAELFAQRG VTVTRFDFEY MQKAGELNRR 
QPPDRMPKLQ AYFSYIIAEL DASLPLFIGG KSMGGRVATM LLDESDAMGG ICFGYPFHPP 
GKLDKLRTEH LAILNKPLLV VQGSRDTFGT QEEMATYDLP STIQTYFLPD GDHSLKPRKR 
SGYTEEAHII AGVDAGVEFI RQLVTSE